Abstract
To compare the sensitivity of the mutation detection techniques single-strand conformation polymorphism analysis (SSCP) and heteroduplex analysis (HA), we analyzed a cohort of 73 patients with a diagnosis of a demyelinating neuropathy, but without the CMT1A duplication, for mutations in the coding region of the myelin genes PMP22, MPZ and Cx32. In total, 21 samples showed 13 distinct altered migration patterns by one or both methods. Ten altered patterns were detected by both SSCP and HA, two were false negative by HA, and one was false negative by SSCP. Our results suggest that either technique can be useful for mutation detection, but a combination of factors appears to affect the sensitivity of both techniques.
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References
Orita M, Suzuki Y, Sekiya T, Hayashi K: Rapid and sensitive detection of point mutations and DNA polymorphisms using the polymerase chain reaction. Genomics 1989;5:874–879
Grompe M: The rapid detection of unknown mutations in nucleic acids. Nature Genet 1993;5:111–117
White MB, Carvalho M, Derse D, O’Brian SJ, Dean M: Detecting single base substitutions as heteroduplex polymorphisms. Genomics 1992;12:301–306
Dyck PJ, Chance P, Lebo R, Carney JA: Hereditary motor and sensory neuropathies; in Dyck PJ, Thomas PK, Griffin JW, Low PA, Poduslo JF (eds): Peripheral Neuropathy. Philadelphia, Saunders, 1993, pp 1094–1136.
Harati Y, Butler IJ: Congenital hypomyelinating neuropathy. J Neurol Neurosurg Psychiatry 1985;48:1269–1276
Vance JM, Nicholson GA, Yamaoka LH, Stajich J, Stewart JS, Speer MC, Hung W, Roses AD, Barker D, Pericak-Vance MA: Linkage of Charcot-Marie-Tooth neuropathy type 1a to chromosome 17. Exp Neurol 1989;104:186–189
Bird TD, Ott J, Giblett ER: Evidence for linkage of Charcot-Mane-Tooth neuropathy to the Duffy locus on chromosome 1. Am J Hum Genet 1982;34:388–394
Gal A, Mücke J, Theile H, Wieacker PF, Ropers HH, Wienker TF: X-linked dominant Charcot-Marie-Tooth disease: Suggestion of linkage with a cloned DNA sequence from the proximal Xq. Hum Genet 1985;70:38–42
Lupski JR, Montes de Oca-Luna R, Slaugenhaupt S, Pentao L, Guzzetta V, Trask BJ, Saucedo-Cardenas O, Barker DF, Killian JM, Garcia CA, Chakravarti A, Patel PI: DNA duplication associated with Charcot-Marie-Tooth disease type 1A. Cell 1991;66:219–239
Raeymaekers P, Timmerman V, Nelis E, De Jonghe P, Hoogendijk JE, Baas F, Barker DF, Martin JJ, de Visser M, Bolhuis PA, Van Broeckhoven C, HMSN Collaborative Research Group: Duplication in chromosome 17p11.2 in Charcot-Marie-Tooth neuropathy type 1a(CMT 1a). Neuromusc Disord 1991;1:93–97
Wise CA, Garcia CA, Davis SN, Heju Z, Pentao L, Patel PI, Lupski JR: Molecular analyses of unrelated Charcot-Marie-Tooth (CMT) disease patients suggest a high frequency of the CMT1A duplication. Am J Hum Genet 1993;53:853–863
Nelis E, Van Broeckhoven C: Estimation of the mutation frequencies in CMT1 and HNPP: A European collaborative study. Eur J Hum Genet 1996;4:25–33
Patel PI, Roa BB, Welcher AA, Schoener-Scott R, Trask BJ, Pentao L, Snipes GJ, Garcia CA, Francke U, Shooter EM, Lupski JR, Suter U: The gene for the peripheral myelin protein PMP-22 is a candidate for Charcot-Marie-Tooth disease type 1A. Nature Genet 1992;1:159–165
Timmerman V, Nelis E, Van Hul W, Nieuwenhuijsen B, Chen K, Wang S, Ben Othman K, Cullen B, Leach RJ, Hanemann CO, De Jonghe P, Raeymaekers P, van Ommen GB, Martin JJ, Müller HW, Vance JM, Fischbeck KH, Van Broeckhoven C: The peripheral myelin protein gene PMP-22 is contained within the Charcot-Marie-Tooth disease type 1A duplication. Nature Genet 1992;1:171–175
Valentijn LJ, Baas F, Wolterman RA, Hoogendijk JE, van den Bosch NHA, Zorn I, Gabreëls-Festen AAWM, de Visser M, Bolhuis PA: Identical point mutations of PMP-22 in Trembler-J mouse and Charcot-Marie-Tooth disease type 1A. Nature Genet 1992;2:288–291
Roa BB, Garcia CA, Suter U, Kulpa DA, Wise CA, Mueller J, Welcher AA, Snipes GJ, Shooter EM, Patel PI, Lupski JR: Charcot-Marie-Tooth disease type 1A. Association with a spontaneous point mutation in the PMP22 gene. N Engl J Med 1993;329:96–101
Roa BB, Dyck PJ, Marks HG, Chance PF, Lupski JR: Dejerine-Sottas syndrome associated with point mutation in the PMP22 gene. Nature Genet 1993;5:269–273
Hayasaka K, Himoro M, Sato W, Takada G, Uyemura K, Shimizu N, Bird T, Conneally PM, Chance PF: Charcot-Marie-Tooth neuropathy type 1B is associated with mutations of the myelin P0 gene. Nature Genet 1993;5:31–34
Kulkens T, Bolhuis PA, Wolterman RA, Kemp S, te Nijenhuis S, Valentijn LJ, Hensels GW, Jennekens FGI, de Visser M, Hoogendijk JE, Baas F: Deletion of the serine 34 codon from the major peripheral myelin protein P0 gene in Charcot-Marie-Tooth disease type 1B. Nature Genet 1993;5:35–39
Hayasaka K, Himoro M, Sawaishi Y, Nanao K, Takahashi T, Takada G, Nicholson GA, Ouvrier RA, Tachi N: De novo mutation of the myelin P0 gene in Dejerine-Sottas disease (hereditary motor and sensory neuropathy type III). Nature Genet 1993;5:266–268
Bergoffen J, Scherer SS, Wang S, Oronzi Scott M, Bone LJ, Paul DL, Chen K, Lensch MW, Chance PF, Fischbeck KH: Connexin mutations in X-linked Charcot-Marie-Tooth disease. Science 1993;262:2039–2042
Warner LE, Hilz MJ, Appel SH, Killian JM, Kolodny EH, Karpati G, Carpenter S, Watters GV, Wheeler C, Witt D, Bodell A, Nelis E, Van Broeckhoven C, Lupski JR: Clinical phenotypes of different MPZ (PO) mutations may include Charcot-Marie-Tooth 1B, Dejerine-Sottas and congenital hypomyelination. Neuron 1996; 17:in press.
Roa BB, Garcia CA, Pentao L, Killian JM, Trask BJ, Suter U, Snipes GJ, Ortiz-Lopez R, Shooter EM, Patel PI, Lupski JR: Evidence for a recessive PMP22 point mutation in Charcot-Marie-Tooth disease type 1A. Nature Genet 1993;5:189–194
Roa BB, Warner LE, Garcia CA, Russo D, Lovelace R, Chance PF, Lupski JR: Myelin protein zero (MPZ) gene mutations in nonduplication type 1 Charcot-Marie-Tooth disease. Hum Mutat 1996;7:36–45
Bone LJ, Dahl N, Lensch MW, Chance PF, Kelly T, Le Guern E, Magi S, Parry G, Shapiro H, Wang S, Fischbeck KH: New connexin32 mutations associated with X-linked Charcot-Marie-Tooth disease. Neurology 1995;45:1863–1866
Nelis E, Timmerman V, De Jonghe P, Vandenberghe A, Pham-Dinh D, Dautigny A, Martin JJ, Van Broeckhoven C: Rapid screening of myelin genes in CMT1 patients by SSCP analysis: Identification of new mutations and polymorphisms in the P0 gene. Hum Genet 1994;94:653–657
Nelis E, Simokovic S, Timmerman V, Löfgren A, Backhovens H, De Jonghe P, Martin JJ, Van Broeckhoven C: Mutation analysis of the connexin32 (Cx32) gene in Charcot-Marie-Tooth neuropathy type 1: Identification of five new mutations. Hum Mutat, in press.
Sheffield VC, Beck JS, Kwitek AE, Sandstrom DW, Stone EM: The sensitivity of single-strand conformation polymorphism analysis for the detection of single base substitutions. Genomics 1993;16:325–332
Acknowledgements
This work was supported in part by a Special Research Fund of the University of Antwerp and grants from the National Fund for Scientific Research, Belgium, to C.V.B., the National Institute of Neurological Disorders and Stroke, the National Institute of Health (R01 NS27042), and the Muscular Dystrophy Association to J.R.L. E.N. is a research assistant of the National Fund for Scientific Research, Belgium.
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Nelis, E., Warner, L.E., De Vriendt, E. et al. Comparison of Single-Strand Conformation Polymorphism and Heteroduplex Analysis for Detection of Mutations in Charcot-Marie-Tooth Type 1 Disease and Related Peripheral Neuropathies. Eur J Hum Genet 4, 329–333 (1996). https://doi.org/10.1159/000472227
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DOI: https://doi.org/10.1159/000472227
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