Abstract
Background:
The estrogen-related receptor α (ERRα or NR3B1) is a transcription factor from the nuclear receptor super-family, group III. The gene encoding ERRα (ESRRA) is located on chromosome 11q13, a region showing genetic linkage to body mass index and fat percentage. Through interaction with the peroxisome proliferator-activated receptor-γ coactivator-1α (PGC-1α), ERRα regulates key enzymes involved in the β-oxidation of fatty acids.
Results:
By screening 48 overweight or obese subjects for variants in the exons, exon–intron boundaries and 1000 base pairs (bp) of the promoter region of ESRRA using bi-directional nucleotide sequencing, we identified seven variants. Four rare variants had minor allele frequencies (MAF) below 1%: Pro369Pro, Gly406Asp, 3′UTR+418G>A, 3′UTR+505C>A. Two single-nucleotide polymorphisms, Pro116Pro and IVS6+65C>T (MAF 15%), were in complete linkage disequilibrium (LD) (r2=1). We also confirmed the presence of a reported 23 bp microsatellite repeat (ESRRA23). The Pro116Pro and ESRRA23 variants were not associated with obesity, type 2 diabetes or related phenotypes in a large population-based study of 6365 Danish whites. The two variants were examined for interactions with variants in the peroxisome proliferator-activated receptor-γ coactivator-1α and -β; however, no evidence of epistatic effects between the variants was demonstrated.
Conclusion:
The ESRRA23 and Pro116Pro variants of the gene encoding ERRα are not associated with obesity, type 2 diabetes or related quantitative traits in the examined Danish whites.
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Acknowledgements
We are indebted to Annemette Forman, Lene Aabo, Lise Wantzin and Marianne Stendal for dedicated and careful technical assistance and to Grete Lademann for secretarial support. The study is supported by the University of Copenhagen, the Danish Diabetes Association, the Danish Heart Foundation, EEC grant (LSHM-CT-2004-005272) and the Danish Medical Research Council (Grant no. 9902592). The Danish Epidemiology Science Centre is supported by the Danish National Research Foundation.
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Larsen, L., Rose, C., Sparsø, T. et al. Genetic analysis of the estrogen-related receptor α and studies of association with obesity and type 2 diabetes. Int J Obes 31, 365–370 (2007). https://doi.org/10.1038/sj.ijo.0803408
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DOI: https://doi.org/10.1038/sj.ijo.0803408
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