Table 2 Mutations and Polymorphisms Identified by the Established DHPLC Conditions

From: Denaturing High Pressure Liquid Chromatography (DHPLC) for the Analysis of Somatic p53 Mutations

Exon

Codon

Base change

Type of mutation

Amino acid change

Origin

−1, 5′ exon 5

 

G>T

splice site

 

cc

5

130

CTC>CGC

missense

Leu>Arg

cc

5

135

TGC>TAC

missense

Cys>Tyr

cc

5

163

TAC>AAC

missense

Tyr>Asn

bca

5

175

CGC>CAC

missense

Arg>His

bca

6

209

del 2bp GA

frame shift

 

cc

6

213

CGA>CGG

silent

Arg>Arg

bl

6

213

CGA>TGA

nonsense

Arg>stop

cc, bca

6

218

del 3bp TGC

in frame deletion

 

bca

−2, 5′ exon 7

 

A>G

splice site

 

cc

7

233

del 8bp

frame shift

 

bca

7

235

del 14bp

frame shift

 

bca

7

240

AGT>AGG

missense

Ser>Arg

uc

7

248

CGG>CAG

missense

Arg>Gln

cc, LF

8

266

GGA>GAA

missense

Gly>Glu

cl

8

266

GGA>GTA

missense

Gly>Val

cc

8

270

TTT>TCT

missense

Phe>Ser

cc

8

273

CGT>CAT

missense

Arg>His

cc, cl

8

275

TGT>TGG

missense

Cys>Trp

bca

8

286

GAA>CAA

missense

Glu>Gln

uc

  1. DHPLC, denaturing high pressure liquid chromatography; cc, colorectal carcinoma; bc, breast carcinoma; uc, urothel carcinoma; cl, cell line; LF, Li Fraumeni patient; bl, blood.
  2. aa Reported by Saitoh et al, 1994.