TABLE 1 Sequences of PCR Primers and Fluorogenic Probes Used in Quantitative PCR

From: Effect of Duration of Fixation on Quantitative Reverse Transcription Polymerase Chain Reaction Analyses

Gene (Reference No.)

Primer/Probe

Sequence

Amplicon Size (bp)

β-Gus (5)

β-Gus-F

CTCATTTGGAATTTTGCCGATT

81

 

β-Gus-R

CCGAGTGAAGATCCCCTTTTTA

 
 

β-Gus-probe

FAM-TGAACAGTCACCGACGAGAGTGCTGG

 

EGFR (5)

EGFR-F

CGCAAGTGTAAGAAGTGCGAA

93

 

EGFR-R

CGTAGCATTTATGGAGAGTGAGTCT

 
 

EGFR-probe

FAM-CCTTGCCGCAAAGTGTGTAACGGAAT

 

MMP-1

MMP-1-F

GAGGGTCAAGCAGACATCATGA

52

 

MMP-1-R

CAAGATTTCCTCCAGGTCCATC

 
 

MMP-1-probe

FAM-TGTCAGGGGAGATCATCGGGACAA

 

p21 (4)

p21-F

CTGGAGACTCTCAGGGTCGAA

66

 

p21-R

GGCGTTTGGAGTGGTAGAAATCT

 
 

p21-probe

FAM-ACGGCGGCAGACCAGCATGA

 

VEGF (5)

VEGF-F

CTCTACCTCCACCATGCCAAG

90

 

VEGF-R

AGACATCCATGAACTTCACCACTTC

 
 

VEGF-probe

FAM-TGGCAGAAGGAGGAGGGCAGAATCA

 
  1. All probes were labeled with 3′TAMRA (6-carboxytetramethylrhodamine) quencher dye. PCR, polymerase chain reaction; FAM = 6-carboxy-fluorescein; EGFR, epidermal growth factor receptor; MMP-1, matrix metalloproteinase; VEGF, vascular endothelial growth factor.