Abstract
Genetic approaches have provided evidence that DNA end-joining problems serve an essential role in neuronal survival during development of mammalian embryos. In the present study, we tested whether the DNA repair enzyme, DNA dependent protein kinase, plays an important role in the survival of cerebral cortical neurons in mice. DNA-PK is comprised of a DNA-binding subunit called Ku and a catalytic subunit called DNA-PKcs. In mice with the scid mutation, DNA-PKcs is truncated near the kinase domain, which causes loss of kinase activity. We compared the spatial and temporal aspects of neuronal cell death in scid versus isogenic wild-type embryos and found a significant increase in dying cells in scid mice, as assessed by nuclear changes, DNA fragmentation and caspase-3 activity. Additional biochemical and immunocytochemical studies indicated that of several DNA repair enzymes investigated, only PARP was increased in scid mice, possibly in response to elevated DNA strand breaks. Cell Death and Differentiation (2001) 8, 245–255
Similar content being viewed by others
Log in or create a free account to read this content
Gain free access to this article, as well as selected content from this journal and more on nature.com
or
Abbreviations
- ATM:
-
ataxia telangiectasia mutated
- CP:
-
cortical plate
- caspase:
-
cysteine dependent aspartate-specific protease
- DNA-PK:
-
DNA dependent protein kinase, DNA-PKcs, DNA dependent protein kinase catalytic subunit
- dsDNA:
-
double stranded DNA
- DTT:
-
dithiothreitol
- HR:
-
homologous recombination
- IZ:
-
intermediate zone
- NHEJ:
-
non-homologous end joining
- PARP:
-
poly (ADP) ribose polymerase
- PCD:
-
programmed cell death
- PMSF:
-
phenylmethylsulfonyl fluoride
- pNA:
-
para-nitroaniline
- RT:
-
room temperature
- scid :
-
severe combined immunodeficiency
- VZ:
-
ventricular zone
- WT:
-
wild-type
- XRCC4:
-
X-ray repair cross complementation-4
References
Pettmann B, Henderson CE . 1998 Neuronal cell death Neuron 20: 633–647
Chun J, Schatz DG . 1999 Rearranging views on neurogenesis: neuronal death in the absence of DNA end-joining proteins Neuron 22: 7–10
Gilmore EC, Nowakowski RS, Caviness Jr VS, Herrup K . 2000 Cell birth, cell death, cell diversity and DNA breaks: how do they all fit together? Trends Neurosci. 23: 100–105
Kuida K, Zheng TS, Na S, Kuan C, Yang D, Karasuyama H, Rakic P, Flavell RA . 1996 Decreased apoptosis in the brain and premature lethality in CPP32-deficient mice Nature 384: 368–372
Kuida K, Haydar TF, Kuan CY, Gu Y, Taya C, Karasuyama H, Su MS, Rakic P, Flavell RA . 1998 Reduced apoptosis and cytochrome c-mediated caspase activation in mice lacking caspase 9 Cell 94: 325–337
Hakem R, Hakem A, Duncan GS, Henderson JT, Wood M, Soengas MS, Elia A, De La Pompa JL, Kagi D, Khoo W, Potter J, Yoshida R, Kaufman SA, Lowe SW, Penninger JM, Mak TW . 1998 Differential requirement for caspase 9 in apoptotic pathways in vivo Cell 94: 339–352
Zheng TS, Flavell RA . 1999 Apoptosis. All's well that ends dead [news] Nature 400: 410–411
Yoshida H, Kong YY, Yoshida R, Elia AJ, Hakem A, Hakem R, Penninger JM, Mak TW . 1998 Apaf1 is required for mitochondrial pathways of apoptosis and brain development Cell 94: 739–750
Cecconi F, Alvarez-Bolado G, Meyer BI, Roth KA, Gruss P . 1998 Apaf1 (CED-4 homolog) regulates programmed cell death in mammalian development Cell 94: 727–737
Gao Y, Sun Y, Frank KM, Dikkes P, Fujiwara Y, Seidl KJ, Sekiguchi JM, Rathbun GA, Swat W, Wang J, Bronson RT, Malynn BA, Bryans M, Zhu C, Chaudhuri J, Davidson L, Ferrini R, Stamato T, Orkin SH, Greenberg ME, Alt FW . 1998 A critical role for DNA end-joining proteins in both lymphogenesis and neurogenesis Cell 95: 891–902
Gu Y, Sekiguchi J, Gao Y, Dikkes P, Frank K, Ferguson D, Hasty P, Chun J, Alt FW . 2000 Defective embryonic neurogenesis in Ku-deficient but not DNA-dependent protein kinase catalytic subunit-deficient mice Proc. Natl. Acad. Sci. USA 97: 2668–2673
Critchlow SE, Jackson SP . 1998 DNA end-joining: from yeast to man Trends Biochem. Sci. 23: 394–398
Smith GC, Jackson SP . 1999 The DNA-dependent protein kinase Genes Dev. 13: 916–934
Grawunder U, Zimmer D, Kulesza P, Lieber MR . 1998 Requirement for an interaction of XRCC4 with DNA ligase IV for wild-type V(D)J recombination and DNA double-strand break repair in vivo J. Biol. Chem. 273: 24708–24714
Dantzer F, Schreiber V, Niedergang C, Trucco C, Flatter E, De La Rubia G, Oliver J, Rolli V, Menissier-De Murcia J, De Murcia G . 1999 Involvement of poly(ADP-ribose) polymerase in base excision repair Biochimie 81: 69–75
Smith GC, Di Fagagna F, Lakin ND, Jackson SP . 1999 Cleavage and inactivation of ATM during apoptosis Mol. Cell. Biol. 19: 6076–6084
Meyn MS . 1999 Ataxia-telangiectasia, cancer and the pathobiology of the ATM gene Clin. Genet. 55: 289–304
Frank KM, Sekiguchi JM, Seidl KJ, Swat W, Rathbun GA, Cheng HL, Davidson L, Kangaloo L, Alt FW . 1998 Late embryonic lethality and impaired V(D)J recombination in mice lacking DNA ligase IV Nature 396: 173–177
Barnes DE, Stamp G, Rosewell I, Denzel A, Lindahl T . 1998 Targeted disruption of the gene encoding DNA ligase IV leads to lethality in embryonic mice Curr. Biol. 8: 1395–1398
Ouyang H, Nussenzweig A, Kurimasa A, Soares VC, Li X, Cordon-Cardo C, Li W, Cheong N, Nussenzweig M, Iliakis G, Chen DJ, Li GC . 1997 Ku70 is required for DNA repair but not for T cell antigen receptor gene recombination in vivo J. Exp. Med. 186: 921–929
Taccioli GE, Amatucci AG, Beamish HJ, Gell D, Xiang XH, Torres Arzayus MI, Priestley A, Jackson SP, Marshak Rothstein A, Jeggo PA, Herrera VL . 1998 Targeted disruption of the catalytic subunit of the DNA-PK gene in mice confers severe combined immunodeficiency and radiosensitivity Immunity 9: 355–366
Gao Y, Chaudhuri J, Zhu C, Davidson L, Weaver DT, Alt FW . 1998 A targeted DNA-PKcs-null mutation reveals DNA-PK independent functions for KU in V(D)J recombination Immunity 9: 367–376
Jhappan C, Morse HC 3rd, Fleischmann RD, Gottesman MM, Merlino G . 1997 DNA-PKcs: a T-cell tumour suppressor encoded at the mouse scid locus Nat. Genet. 17: 483–486
Bosma MJ, Carroll AM . 1991 The SCID mouse mutant: definition, characterization, and potential uses Annu. Rev. Immunol. 9: 323–350
Chakravarthy BR, Walker T, Rasquinha I, Hill IE, Macmanus JP . 1999 Activation of DNA-dependent protein kinase may play a role in apoptosis of human neuroblastoma cells J. Neurochem. 72: 933–942
Masutani M, Nozaki T, Nishiyama E, Shimokawa T, Tachi Y, Suzuki H, Nakagama H, Wakabayashi K, Sugimura T . 1999 Function of poly(ADP-ribose) polymerase in response to DNA damage: gene-disruption study in mice Mol. Cell. Biochem. 193: 149–152
Shieh SM, Ame JC, Wilson MV, Wang ZQ, Koh DW, Jacobson MK, Jacobson EL . 1998 Poly(ADP-ribose) polymerase null mouse cells synthesize ADP-ribose polymers J. Biol. Chem. 273: 30069–30072
Clarke PGH . 1999 Apoptosis versus necrosis: how valid a dichotomy for neurons? In Cell Death and Diseases of the Nervous System. Koliatsos V and Ratan R eds Totowa, New Jersey, Humana Press pp. 3–28
Wyllie AH, Kerr JF, Currie AR . 1980 Cell death: the significance of apoptosis Int. Rev. Cytol. 68: 251–306
Upender MB, Dunn JA, Wilson SM, Naegele JR . 1997 Immunoglobulin molecules are present in early-generated neuronal populations in the rat cerebral cortex and retina J. Comp. Neurol. 384: 271–282
Weiner JA, Chun J . 1997 Maternally derived immunoglobulin light chain is present in the fetal mammalian CNS J. Neurosci. 17: 3147–3156
Danska JS, Holland DP, Mariathasan S, Williams KM, Guidos CJ . 1996 Biochemical and genetic defects in the DNA-dependent protein kinase in murine scid lymphocytes Mol. Cell. Biol. 16: 5507–5517
Achari Y, Lees-Miller SP . 2000 Detection of DNA dependent Protein kinase in extracts from human and rodent cells Methods in Molecular Biology 99: 85–97
Gell D, Jackson SP . 1999 Mapping of protein-protein interactions within the DNA-dependent protein kinase complex Nucleic Acids Res. 27: 3494–3502
Buck L, Axel R . 1991 A novel multigene family may encode odorant receptors: a molecular basis for odor recognition Cell 65: 175–187
Beamish HJ, Jessberger R, Riballo E, Priestley A, Blunt T, Kysela B, Jeggo PA . 2000 The C-terminal conserved domain of DNA-PKcs, missing in the SCID mouse, is required for kinase activity Nucleic Acids Res. 28: 1506–1513
Casciola-Rosen LA, Anhalt GJ, Rosen A . 1995 DNA-dependent protein kinase is one of a subset of autoantigens specifically cleaved early during apoptosis J. Exp. Med. 182: 1625–1634
Song Q, Lees-Miller SP, Kumar S, Zhang Z, Chan DW, Smith GC, Jackson SP, Alnemri ES, Litwack G, Khanna KK, Lavin MF . 1996 DNA-dependent protein kinase catalytic subunit: a target for an ICE-like protease in apoptosis EMBO. J. 15: 3238–3246
Mcconnell KR, Dynan WS, Hardin JA . 1997 The DNA-dependent protein kinase catalytic subunit (p460) is cleaved during Fas-mediated apoptosis in Jurkat cells J. Immunol., 158: 2083–2089
Anderson CW, Lees-Miller SP . 1992 The nuclear serine/threonine protein kinase DNA-PK Crit. Rev. Eukaryot. Gene Expr. 2: 283–314
Blunt T, Gell D, Fox M, Taccioli GE, Lehmann AR, Jackson SP, Jeggo PA . 1996 Identification of a nonsense mutation in the carboxyl-terminal region of DNA-dependent protein kinase catalytic subunit in the scid mouse Proc. Natl. Acad. Sci. USA 93: 10285–10290
Gottlieb TM, Jackson SP . 1993 The DNA-dependent protein kinase requirement for DNA ends and association with Ku antigen Cell 72: 131–142
Ruscetti T, Lehnert BE, Halbrook J, Le Trong H, Hoekstra MF, Chen DJ, Peterson SR . 1998 Stimulation of the DNA-dependent protein kinase by poly(ADP-ribose) polymerase J. Biol. Chem. 273: 14461–14467
Rotman G, Shiloh Y . 1997 Ataxia-telangiectasia: is ATM a sensor of oxidative damage and stress? Bioessays 19: 911–917
Rotman G, Shiloh Y . 1998 ATM: from gene to function Hum. Mol. Genet. 7: 1555–1563
Lavin MF, Shiloh Y . 1997 The genetic defect in ataxia-telangiectasia Annu. Rev. Immunol. 15: 177–202
Eilam R, Peter Y, Elson A, Rotman G, Shiloh Y, Groner Y, Segal M . 1998 Selective loss of dopaminergic nigro-striatal neurons in brains of Atm-deficient mice Proc. Natl. Acad. Sci. USA 95: 12653–12656
Savitsky K, Bar-Shira A, Gilad S, Rotman G, Ziv Y, Vanagaite L, Tagle DA, Smith S, Uziel T, Sfez S, et al . 1995 A single ataxia telangiectasia gene with a product similar to PI-3 kinase [see comments] Science 268: 1749–1753
Rosen A, Casciola-Rosen L . 1997 Macromolecular substrates for the ICE-like proteases during apoptosis J. Cell. Biochem. 64: 50–54
Duriez PJ, Shah GM . 1997 Cleavage of poly(ADP-ribose) polymerase: a sensitive parameter to study cell death Biochem. Cell. Biol. 75: 337–349
Satoh MS, Lindahl T . 1992 Role of poly(ADP-ribose) formation in DNA repair Nature 356: 356–358
Laplaca MC, Raghupathi R, Verma A, Pieper AA, Saatman KE, Snyder SH, Mcintosh TK . 1999 Temporal patterns of poly(ADP-ribose) polymerase activation in the cortex following experimental brain injury in the rat J. Neurochem. 73: 205–213
Blaschke AJ, Staley K, Chun J . 1996 Widespread programmed cell death in proliferative and postmitotic regions of the fetal cerebral cortex Development 122: 1165–1174
Chun J . 2000 Cell death, DNA breaks and possible rearrangements: an alternative view Trends Neurosci. 23: 407–408
Velier JJ, Ellison JA, Kikly KK, Spera PA, Barone FC, Feuerstein GZ . 1999 Caspase-8 and caspase-3 are expressed by different populations of cortical neurons undergoing delayed cell death after focal stroke in the rat J. Neurosci. 19: 5932–5941
Yue T-L, Wang C, Romanic AM, Kikly K, Keller P, Dewolf WE, Hart TK, Thomas HC, Storer B, Gu J-L, Wang X, Feuerstein GZ . 1998 Staurosporine-induced apoptosis in cardiomyocytes: a potential role of caspase-3 J. Mol. Cell. Cardiol. 30: 495–507
Han Z, Malik N, Carter T, Reeves WH, Wyche JH, Hendrickson EA . 1996 DNA-dependent protein kinase is a target for a CPP32-like apoptotic protease J. Biol. Chem. 271: 25035–25040
Acknowledgements
The authors thank members of the Naegele lab including: Magda Chechlacz, Karen Gilliams-Francis, Joshua Gooley, Andrew Scott, Matt Daugherty, and Jenn Weiss for scientific discussions. In addition, we would like to thank Aruna Vemuri for technical assistance, Lisa Gagnon for animal husbandry and Paul Lombroso for helpful comments on the manuscript. This work has been supported by NSF grant IBN-9600974.
Author information
Authors and Affiliations
Corresponding author
Additional information
Edited by CJ Thiele
Rights and permissions
About this article
Cite this article
Vemuri, M., Schiller, E. & Naegele, J. Elevated DNA double strand breaks and apoptosis in the CNS of scid mutant mice. Cell Death Differ 8, 245–255 (2001). https://doi.org/10.1038/sj.cdd.4400806
Received:
Revised:
Accepted:
Published:
Issue date:
DOI: https://doi.org/10.1038/sj.cdd.4400806
Keywords
This article is cited by
-
Nhej1 Deficiency Causes Abnormal Development of the Cerebral Cortex
Molecular Neurobiology (2015)
-
Mutations in PNKP cause microcephaly, seizures and defects in DNA repair
Nature Genetics (2010)
-
DNA-PK promotes the survival of young neurons in the embryonic mouse retina
Cell Death & Differentiation (2010)
-
Genetic interaction between DNA polymerase β and DNA-PKcs in embryogenesis and neurogenesis
Cell Death & Differentiation (2005)