Abstract
Gradual disclosure of the molecular basis of selective neuronal apoptosis during neurodegenerative diseases reveals active participation of acetylating and deacetylating agents during the process. Several studies have now successfully manipulated neuronal vulnerability by influencing the dose and enzymatic activity of histone acetyltransferases (HATs) and histone deacetylases (HDACs), enzymes regulating acetylation homeostasis within the nucleus, thus focusing on the importance of balanced acetylation status in neuronal vitality. It is now increasingly becoming clear that acetylation balance is greatly impaired during neurodegenerative conditions. Herein, we attempt to illuminate molecular means by which such impairment is manifested and how the compromised acetylation homeostasis is intimately coupled to neurodegeneration. Finally, we discuss the therapeutic potential of reinstating the HAT–HDAC balance to ameliorate neurodegenerative diseases.
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Abbreviations
- AD:
-
Alzheimer's disease
- CaMK:
-
calcium/calmodulin-dependent kinase
- CBP:
-
CREB binding protein
- CDK:
-
cyclin-dependent kinase
- CRE:
-
cAMP-response element
- CREB:
-
cAMP-response element binding (protein)
- HAT:
-
histone acetyltransferase
- HD:
-
Huntington's disease
- HDAC:
-
histone deacetylase
- HIF:
-
hypoxia-induced factor
- IκB:
-
inhibitory kappaB
- MAPK:
-
mitogen-activated protein kinase
- NaBu:
-
sodium butyrate
- NF-κB:
-
nuclear factor kappaB
- NGF:
-
nerve growth factor
- NMDA:
-
N-methyl-D-aspartate
- P/CAF:
-
p300/CBP-associated factor
- PKA:
-
protein kinase A
- PML:
-
promyelocytic leukemia
- REST:
-
repressor element transcription factor
- RPD3:
-
reduced potassium deficiency3
- SAHA:
-
suberoylanilide hydroxamic acid
- SMA:
-
spinal muscular atrophy
- SMM:
-
small molecule modulators
- SP:
-
specificity protein
- TAD:
-
transactivation domain
- TF:
-
transcription factor
- TSA:
-
trichostatin A
References
Taunton J, Hassig CA and Schreiber SL (1996) A mammalian histone deacetylase related to the yeast transcriptional regulator Rpd3p. Science 272: 408–411
Timmermann S, Lehrmann H, Polesskaya A and Harel-Bellan A (2001) Histone acetylation and disease. Cell Mol. Life Sci. 58: 728–736
Marmorstein R and Roth SY (2001) Histone acetyltransferases: function, structure, and catalysis. Curr. Opin. Genet. Dev. 11: 155–161
Thiagalingam S, Cheng KH, Lee HJ, Mineva N, Thiagalingam A and Ponte JF (2003) Histone deacetylases: unique players in shaping the epigenetic histone code. Ann. N. Y. Acad. Sci. 983: 84–100
LaMorte VJ, Dyck JA, Ochs RL and Evans RM (1998) Localization of nascent RNA and CREB binding protein with the PML-containing nuclear body. Proc. Natl. Acad. Sci. USA 95: 4991–4996
Zanger K, Radovick S and Wondisford FE (2001) CREB binding protein recruitment to the transcription complex requires growth factor-dependent phosphorylation of its GF box. Mol. Cell. 7: 551–558
Liu YZ, Chrivia JC and Latchman DS (1998) Nerve growth factor up-regulates the transcriptional activity of CBP through activation of the p42/p44 (MAPK) cascade. J. Biol. Chem. 273: 32400–32407
Liu YZ, Thomas NS and Latchman DS (1999) CBP associates with the p42/p44 MAPK enzymes and is phosphorylated following NGF treatment. Neuroreport 10: 1239–1243
Swope DL, Mueller CL and Chrivia JC (1996) CREB-binding protein activates transcription through multiple domains. J. Biol. Chem. 271: 28138–28145
Nakajima T, Fukamizu A, Takahashi J, Gage FH, Fisher T, Blenis J and Montminy MR (1996) The signal-dependent coactivator CBP is a nuclear target for pp90RSK . Cell 86: 465–474
Impey S, Fong AL, Wang Y, Cardinaux JR, Fass DM, Obrietan K, Wayman GA, Storm DR, Soderling TR and Goodman RH (2002) Phosphorylation of CBP mediates transcriptional activation by neural activity and CaM kinase IV. Neuron 34: 235–244
Hu SC, Chrivia J and Ghosh A (1999) Regulation of CBP-mediated transcription by neuronal calcium signaling. Neuron 22: 799–808
Lee H, Rezai-Zadeh N and Seto E (2004) Negative regulation of histone deacetylase 8 activity by cyclic AMP-dependent protein kinase A. Mol. Cell. Biol. 24: 765–773
Chawla S, Vanhoutte P, Arnold FJ, Huang CL and Bading H (2003) Neuronal activity-dependent nucleocytoplasmic shuttling of HDAC4 and HDAC5. J. Neurochem. 85: 151–159
Boutillier AL, Trinh E and Loeffler JP (2003) Selective E2F-dependent gene transcription is controlled by histone deacetylase activity during neuronal apoptosis. J. Neurochem. 84: 814–828
Rouaux C, Jokic N, Mbebi C, Boutillier S, Loeffler JP and Boutillier AL (2003) Critical loss of CBP/p300 histone acetylase activity by caspase-6 during neurodegeneration. EMBO J. 22: 6537–6549
Jiang H, Nucifora Jr FC, Ross CA and DeFranco DB (2003) Cell death triggered by polyglutamine-expanded huntingtin in a neuronal cell line is associated with degradation of CREB-binding protein. Hum. Mol. Genet. 12: 1–12
Jin K, Mao XO, Simon RP and Greenberg DA (2001) Cyclic AMP response element binding protein (CREB) and CREB binding protein (CBP) in global cerebral ischemia. J. Mol. Neurosci. 16: 49–56
Nucifora Jr FC, Sasaki M, Peters MF, Huang H, Cooper JK, Yamada M, Takahashi H, Tsuji S, Troncoso J, Dawson VL, Dawson TM and Ross CA (2001) Interference by huntingtin and atrophin-1 with cbp-mediated transcription leading to cellular toxicity. Science 291: 2423–2428
McCampbell A, Taye AA, Whitty L, Penney E, Steffan JS and Fischbeck KH (2001) Histone deacetylase inhibitors reduce polyglutamine toxicity. Proc. Natl. Acad. Sci. USA 98: 15179–15184
Taylor JP, Taye AA, Campbell C, Kazemi-Esfarjani P, Fischbeck KH and Min KT (2003) Aberrant histone acetylation, altered transcription, and retinal degeneration in a Drosophila model of polyglutamine disease are rescued by CREB-binding protein. Genes. Dev. 17: 1463–1468
Ryu H, Lee J, Olofsson BA, Mwidau A, Dedeoglu A, Escudero M, Flemington E, Azizkhan-Clifford J, Ferrante RJ and Ratan RR (2003) Histone deacetylase inhibitors prevent oxidative neuronal death independent of expanded polyglutamine repeats via an Sp1-dependent pathway. Proc. Natl. Acad. Sci. USA 100: 4281–4286
Steffan JS, Bodai L, Pallos J, Poelman M, McCampbell A, Apostol BL, Kazantsev A, Schmidt E, Zhu YZ, Greenwald M, Kurokawa R, Housman DE, Jackson GR, Marsh JL and Thompson LM (2001) Histone deacetylase inhibitors arrest polyglutamine-dependent neurodegeneration in Drosophila. Nature 413: 739–743
Marambaud P, Wen PH, Dutt A, Shioi J, Takashima A, Siman R and Robakis NK (2003) A CBP binding transcriptional repressor produced by the PS1/epsilon-cleavage of N-cadherin is inhibited by PS1 FAD mutations. Cell 114: 635–645
Hoshino M, Tagawa K, Okuda T, Murata M, Oyanagi K, Arai N, Mizutani T, Kanazawa I, Wanker EE and Okazawa H (2003) Histone deacetylase activity is retained in primary neurons expressing mutant huntingtin protein. J. Neurochem. 87: 257–267
Sugars KL and Rubinsztein DC (2003) Transcriptional abnormalities in Huntington disease. Trends Genet. 19: 233–238
Cha JH (2000) Transcriptional dysregulation in Huntington's disease. Trends Neurosci. 23: 387–392
Riccio A, Ahn S, Davenport CM, Blendy JA and Ginty DD (1999) Mediation by a CREB family transcription factor of NGF-dependent survival of sympathetic neurons. Science 286: 2358–2361
Shi Y, Venkataraman SL, Dodson GE, Mabb AM, LeBlanc S and Tibbetts RS (2004) Direct regulation of CREB transcriptional activity by ATM in response to genotoxic stress. Proc. Natl. Acad. Sci. USA 101: 5898–5903
Zhang Q, Vo N and Goodman RH (2000) Histone binding protein RbAp48 interacts with a complex of CREB binding protein and phosphorylated CREB. Mol. Cell. Biol. 20: 4970–4978
Zuccato C, Ciammola A, Rigamonti D, Leavitt BR, Goffredo D, Conti L, MacDonald ME, Friedlander RM, Silani V, Hayden MR, Timmusk T, Sipione S and Cattaneo E (2001) Loss of huntingtin-mediated BDNF gene transcription in Huntington's disease. Science 293: 493–498
Zhong H, May MJ, Jimi E and Ghosh S (2002) The phosphorylation status of nuclear NF-kappa B determines its association with CBP/p300 or HDAC-1. Mol. Cell. 9: 625–636
Chen LF and Greene WC (2004) Shaping the nuclear action of NF-kappaB. Nat. Rev. Mol. Cell. Biol. 5: 392–401
Acker T and Acker H (2004) Cellular oxygen sensing need in CNS function: physiological and pathological implications. J. Exp. Biol. 207: 3171–3188
Semenza GL (2000) HIF-1 and human disease: one highly involved factor. Genes Dev. 14: 1983–1991
Arany Z, Huang LE, Eckner R, Bhattacharya S, Jiang C, Goldberg MA, Bunn HF and Livingston DM (1996) An essential role for p300/CBP in the cellular response to hypoxia. Proc. Natl. Acad. Sci. USA 93: 12969–12973
Ryu H, Lee J, Zaman K, Kubilis J, Ferrante RJ, Ross BD, Neve R and Ratan RR (2003) Sp1 and Sp3 are oxidative stress-inducible, antideath transcription factors in cortical neurons. J. Neurosci. 23: 3597–3606
Huang Y, Myers SJ and Dingledine R (1999) Transcriptional repression by REST: recruitment of Sin3A and histone deacetylase to neuronal genes. Nat. Neurosci. 2: 867–872
Greene LA, Biswas SC and Liu DX (2004) Cell cycle molecules and vertebrate neuron death: E2F at the hub. Cell Death Differ. 11: 49–60
Kolli S, Buchmann AM, Williams J, Weitzman S and Thimmapaya B (2001) Antisense-mediated depletion of p300 in human cells leads to premature G1 exit and up-regulation of c-MYC. Proc. Natl. Acad. Sci. USA 98: 4646–4651
Rajabi HN, Baluchamy S, Kolli S, Nag A, Srinivas R, Raychaudhuri P and Thimmapaya B (2005) Effects of depletion of CREB-binding protein on c-Myc regulation and cell cycle G1-S transition. J. Biol. Chem. 280: 361–374
Katchanov J, Harms C, Gertz K, Hauck L, Waeber C, Hirt L, Priller J, von Harsdorf R, Bruck W, Hortnagl H, Dirnagl U, Bhide PG and Endres M (2001) Mild cerebral ischemia induces loss of cyclin-dependent kinase inhibitors and activation of cell cycle machinery before delayed neuronal cell death. J. Neurosci. 21: 5045–5053
Davis T, Kennedy C, Chiew YE, Clarke CL and DeFazio A (2000) Histone deacetylase inhibitors decrease proliferation and modulate cell cycle gene expression in normal mammary epithelial cells. Clin. Cancer Res. 6: 4334–4342
Ianari A, Gallo R, Palma M, Alesse E and Gulino A (2004) Specific role for p300/CREB-binding protein-associated factor activity in E2F1 stabilization in response to DNA damage. J. Biol. Chem. 279: 30830–30835
van der Horst A, Tertoolen LG, de Vries-Smits LM, Frye RA, Medema RH and Burgering BM (2004) FOXO4 is acetylated upon peroxide stress and deacetylated by the longevity protein hSir2(SIRT1). J. Biol. Chem. 279: 28873–28879
Vries RG, Prudenziati M, Zwartjes C, Verlaan M, Kalkhoven E and Zantema A (2001) A specific lysine in c-Jun is required for transcriptional repression by E1A and is acetylated by p300. EMBO J. 20: 6095–6103
Hughes RE, Lo RS, Davis C, Strand AD, Neal CL, Olson JM and Fields S (2001) Altered transcription in yeast expressing expanded polyglutamine. Proc. Natl. Acad. Sci. USA 98: 13201–13206
Hockly E, Richon VM, Woodman B, Smith DL, Zhou X, Rosa E, Sathasivam K, Ghazi-Noori S, Mahal A, Lowden PA, Steffan JS, Marsh JL, Thompson LM, Lewis CM, Marks PA and Bates GP (2003) Suberoylanilide hydroxamic acid, a histone deacetylase inhibitor, ameliorates motor deficits in a mouse model of Huntington's disease. Proc. Natl. Acad. Sci. USA 100: 2041–2046
Ferrante RJ, Kubilus JK, Lee J, Ryu H, Beesen A, Zucker B, Smith K, Kowall NW, Ratan RR, Luthi-Carter R and Hersch SM (2003) Histone deacetylase inhibition by sodium butyrate chemotherapy ameliorates the neurodegenerative phenotype in Huntington's disease mice. J. Neurosci. 23: 9418–9427
Gardian G, Browne SE, Choi DK, Klivenyi P, Gregorio J, Kubilus JK, Ryu H, Langley B, Ratan RR, Ferrante RJ and Beal MF (2005) Neuroprotective effects of phenylbutyrate in the N171-82Q transgenic mouse model of Huntington's disease. J. Biol. Chem. 280: 556–563
Chang JG, Hsieh-Li HM, Jong YJ, Wang NM, Tsai CH and Li H (2001) Treatment of spinal muscular atrophy by sodium butyrate. Proc. Natl. Acad. Sci. USA 98: 9808–9813
Minamiyama M, Katsuno M, Adachi H, Waza M, Sang C, Kobayashi Y, Tanaka F, Doyu M, Inukai A and Sobue G (2004) Sodium butyrate ameliorates phenotypic expression in a transgenic mouse model of spinal and bulbar muscular atrophy. Hum. Mol. Genet. 13: 1183–1192
Ryu H, Smith K, Camelo SI, Carreras I, Lee J, Iglesias AH, Dangond F, Cormier KA, Cudkowicz ME, Brown RH and Ferrante RJ (2005) Sodium phenylbutyrate prolongs survival and regulates expression of anti-apoptotic genes in transgenic amyotrophic lateral sclerosis mice. J. Neurochem. 93: 1087–1098
McCampbell A and Fischbeck KH (2001) Polyglutamine and CBP: fatal attraction? Nat. Med. 7: 528–530
Rouaux C, Loeffler JP and Boutillier AL (2004) Targeting CREB-binding protein (CBP) loss of function as a therapeutic strategy in neurological disorders. Biochem. Pharmacol. 68: 1157–1164
Varier RA, Swaminathan V, Balasubramanyam K and Kundu TK (2004) Implications of small molecule activators and inhibitors of histone acetyltransferases in chromatin therapy. Biochem. Pharmacol. 68: 1215–1220
Freeland K, Boxer LM and Latchman DS (2001) The cyclic AMP response element in the Bcl-2 promoter confers inducibility by hypoxia in neuronal cells. Brain Res. Mol. Brain Res. 92: 98–106
Guo Z, Boekhoudt GH and Boss JM (2003) Role of the intronic enhancer in tumor necrosis factor-mediated induction of manganous superoxide dismutase. J. Biol. Chem. 278: 23570–23578
Saura CA, Moons L, Storkebaum E, Beck H, Nuyens D, Brusselmans K, Van Dorpe OJ, Hellings P, Gorselink M, Heymans S, Theilmeyer G, Dewerchin M, Landenbach V, Vermylen P, Raat H, Acker T, Yleminckx V, Van Den Bosch L, Cashman N, Fujisawa H, Drost MR, Sciot R, Bruyninckx F, Hicklin DJ, Ince C, Gressens P, Lupu F, Plate KH, Robberecht W, Herbert JM, Collen D and Carmeliet P (2004) Loss of presenilin function causes impairments of memory and synaptic plasticity followed by age-dependent neurodegeneration. Neuron 42: 23–36
Sopher BL, Thomas Jr PS, LaFevre-Bernt MA, Holm IE, Wilke SA, Ware CB, Jin LW, Libby RT, Ellerby LM and La Spada AR (2004) Androgen receptor YAC transgenic mice recapitulate SBMA motor neuronopathy and implicate VEGF164 in the motor neuron degeneration. Neuron 41: 687–699
Acknowledgements
This study was supported by grants from NIH (NS39940 and AG19487), National Multiple Sclerosis Society (RG3422A1/1), and Michael J Fox Foundation for Parkinson Research to KP and UNMC graduate assistantship to RNS. We thank V Yennu of MD Anderson, TX, for his support in literature research.
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Saha, R., Pahan, K. HATs and HDACs in neurodegeneration: a tale of disconcerted acetylation homeostasis. Cell Death Differ 13, 539–550 (2006). https://doi.org/10.1038/sj.cdd.4401769
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DOI: https://doi.org/10.1038/sj.cdd.4401769
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