Abstract
A novel sequence change in repeat 3 of the promoter of the low-density lipoprotein receptor (LDLR) gene, −139C>G, has been identified in a patient with familial hypercholesterolemia (FH). LDLR -139G has been passed to one offspring who also shows an FH phenotype. Transient transfection studies using luciferase gene reporter assays revealed a considerable reduction (74±1.4% SEM) in reporter gene expression from the −139G variant sequence compared to the wild-type sequence, strongly suggesting that this change is the basis for FH in these patients. Analysis using electrophoretic mobility shift assay demonstrated the loss of Sp1 binding to the variant sequence in vitro, explaining the reduction of transcription.
Similar content being viewed by others

Log in or create a free account to read this content
Gain free access to this article, as well as selected content from this journal and more on nature.com
or
References
Dedoussis GVZ, Schmidt H, Genschel J : LDL-receptor mutations in Europe. Hum Mut 2004; 24: 443–459.
Miller SA, Dykes DD, Polesky HF : A simple salting out procedure for extracting DNA from human nucleated cells. Nucleic Acid Res 1988; 16: 1215.
Heath KE, Humphries SE, Middleton-Price H, Boxer M : A molecular genetic service for diagnosing individuals with familial hypercholesterolaemia (FH) in the United Kingdom. Eur J Hum Genet 2001; 9: 244–252.
Bunn CF, Lintott CJ, Scott RS, George PM : Comparison of SSCP and DHPLC for the detection of LDLR mutations in a New Zealand cohort. Hum Mutat 2002; 19: 311.
Dedoussis GV, Pitsavos C, Kelberman D et al: a novel mutation in the promoter (-45delT) of the low-density lipoprotein receptor gene associated with familial hypercholesterolemia. Clin Genet 2003; 64: 414–419.
Sun XM, Neuwirth C, Wade DP, Knight BL, Soutar AK : A mutation (T-45C) in the promoter region of the low-density-lipoprotein (LDL)-receptor gene is associated with a mild clinical phenotype in a patient with heterozygous familial hypercholesterolaemia (FH). Hum Mol Genet 1995; 4: 2125–2129.
Francova H, Trbusek M, Zapletalova P, Kuhrova V : New promoter mutations in the low-density lipoprotein receptor gene which induce familial hypercholesterolaemia phenotype: molecular and functional analysis. J Inherit Metab Dis 2004; 27: 523–528.
Mozas P, Galetto R, Albajar M, Ros E, Pocovi M, Rodriguez-Rey JC : A mutation (−49C>T) in the promoter of the low density lipoprotein receptor gene associated with familial hypercholesterolemia. J Lipid Res 2002; 43: 13–18.
Hobbs HH, Brown MS, Goldstein JL : Molecular genetics of the LDL receptor gene in familial hypercholesterolemia. Hum Mutat 1992; 1: 445–466.
Koivisto UM, Palvimo JJ, Janne OA, Kontula K : A single-base substitution in the proximal Sp1 site of the human low density lipoprotein receptor promoter as a cause of heterozygous familial hypercholesterolemia. Proc Natl Acad Sci USA 1994; 91: 10526–10530.
Acknowledgements
This work was supported by the British Heart Foundation (RG2005/015), and by a grant from the Department of Health to the London IDEAS GKP.
Author information
Authors and Affiliations
Corresponding author
Rights and permissions
About this article
Cite this article
Smith, A., Ahmed, F., Nair, D. et al. A functional mutation in the LDLR promoter (−139C>G) in a patient with familial hypercholesterolemia. Eur J Hum Genet 15, 1186–1189 (2007). https://doi.org/10.1038/sj.ejhg.5201897
Received:
Revised:
Accepted:
Published:
Issue date:
DOI: https://doi.org/10.1038/sj.ejhg.5201897
Keywords
This article is cited by
-
Functional analysis of four LDLR 5′UTR and promoter variants in patients with familial hypercholesterolaemia
European Journal of Human Genetics (2015)