Table 1 Primers used for semiquantitative RT–PCR analyses

From: Analysis of differential gene expression in human melanocytic tumour lesions by custom made oligonucleotide arrays

Gene symbol

Primers

MgCl2 (m M)

THBD

F: 5′-GTGGACGGCGAGTGTGTG-3′

1.5

 

R: 5′-CAGAGGTAGCTAGTTTGGTTCAGG-3′

 

GRCC10

F: 5′-TCGTGCTGCCCGTGG-3′

1.5

 

R: 5′-AGGCTGGCGATCTCAGGAT-3′

 

FABP7

F: 5′-AACTTGTTCACATACAGAAATGGGAT-3′

2.0

 

R: 5′-AGAACATTTTTATGCCTTCTCA-3′

 

H2AFJ

F: 5′-CGTGCTGCTGCCCAAGA-3′

1.5

 

R: 5′-TTGCGGGACGACCATGA-3′

 

TYRP1

F: 5′-CTTGGAAGATTATGATACCCTGGG-3′

1.5

 

R: 5′-GAGCGACATCCTGTGGTTCA-3′

 

MYL6

F: 5′-GAAGCGTTTGTGAGGCATATCC-3′

2.0

 

R: 5′-TAGATACAAAATTCACACAGGGAAAGG-3′

 

D4S234E

F: 5′-TTCCTCACCTGCGTCGTCTT-3′

1.5

 

R: 5′-CGTAGTAGCTCTCCAAGCGTTCTG-3′

 

CD74

F: 5′-GAAGATCAGAAGCCAGTCATGG-3′

1.5

 

R: 5′-AGAGCTACCAGGATGGAAAAGC-3′

 

C7orf20

F: 5′-GCCGCTGCTTAACTTCATCTG-3′

1.5

 

R: 5′-GTCCTATGCGGTCGAGGTACTC-3′

 

COL6A1

F: 5′-GCGACGCACTCAAAAGCA-3′

1.5

 

R: 5′-GGTACTTATTCTCCTTCAGGTGGG-3′

 

CGI-127

F: 5′-GACCAACCGCTCAGAACTCATC-3′

1.5

 

R: 5′-AGCATGACCCGASTCTTGAACTT-3′

 

RRAGD

F: 5′-ATTGACTTTTTTGACCCTACATTTGAC-3′

1.5

 

R: 5′-GCCAGGGCTTCCATGTAATC-3′

 

MYADM

F: 5′-GTGGCTCAATCCGTCTCCA-3′

2.0

 

R: 5′-GATGGTGGTGCGGGTTACC-3′

 

HR

F: 5′-CAAGGATGTGGACTCGGGA-3′

1.5

 

R: 5′-CAGTTTTGCAGGGAGAGCCA-3′

 

FLJ10349

F: 5′-GCCACCATGCTGCACGT-3′

1.5

 

R: 5′-GTGGTCAAGCAGGTAGGAGAGG-3′

 

ARF4

F: 5′-CCCTCTTCTCCCGACTATTTGG-3′

1.5

 

R: 5′-ATTGGTGGTGACTATCTCCCCTAAC-3′

 

CTSL

F: 5′-CTGTAGCAGTGAAGACATGGATCA-3′

1.5

 

R: 5′-CGTAGCCACCCATGCCC-3′

 

PGK1

F: 5′- TAAAGGGAAGCGGGTCGTT-3′

1.5

 

R: 5′-GTGGCTCATAAGGACTACCGACTT-3′

 

CKS2

F: 5′-CGCTCTCGTTTCATTTTCTGC-3′

1.5

 

R: 5′-TGGAAAGTTCTCTGGGTAACATAACA-3′

 

CDKN3

F: 5′-TACAACCTGCCTTAAAAATTACCGA-3′

1.5

 

R: 5′-GACAGGTATAGTAGGAGACAAGCAGCT-3′

 

NCK2

F: 5′-GGCTATGTACCGTCCAACTACG-3′

1.5

 

R: 5′-GCTGGTCTTCCTGCGC-3′

 

ITGB5

F: 5′-GAGGAAGTGTGAGGGTCTGAAGA-3′

1.5

 

R: 5′-TGACCCCCACCTCCAGGCT-3′

 

UBE2S

F: 5′-CCAGGTCACCATCGAGGG-3′

1.5

 

R: 5′-CTTCCCCAGCAGGAGTTTCA-3′

 

DUSP6

F: 5′-CCTTCCTTCCCAGTGGAGATC-3′

2.0

 

R: 5′-CTCAAAGAGATTCGGCAAATTGG-3′

 

GDF15

F: 5′-CGAAGACTCCAGATTCCGAGAG-3′

1.5

 

R: 5′-CCAGCCGCACTTCTGGC-3′

 

GAPDH

F: 5′-CGACAGTCAGCCGCATCTT-3′

1.5

 

R: 5′-GCCCAATACGACCAAATCCG-3′

 

β-Actin

F: 5′-CGTGCTGCTGACCGAGG-3′

1.5

 

R: 5′-GCAACGTACATGGCTGGGG-3′