Table 3 Novel genes identified by DDD

From: Net1 and Myeov: computationally identified mediators of gastric cancer

Symbol

Name

UniGene ID

GA a

Non cancer a

Cancer a

Function

AGR2

Arginase, type II

Hs.226391

0.00242

0.00012

0.00017

Urea cycle

ANKRD9

Ankyrin repeat domain 9

Hs.432945

0.00098

0.00002

0.00004

Function unknown

ARHGEF16

Rho guanine exchange factor 16

Hs.87435

0.00032

0.00002

0.00002

Function unknown

BENE

BENE protein

Hs.185055

0.00059

0.00003

0.00004

Function unknown

C8G

Complement component 8, gamma polypeptide

Hs.1285

0.00016

0.00000

0.00000

Complement activation

CLDN18

Claudin 18

Hs.278966

0.00043

0.00003

0.00001

Tight junction component

CLDN2

Claudin 2

Hs.16098

0.00023

0.00002

0.00002

Tight junction component

EPS8L3

EPS8-like 3

Hs.5366

0.00021

0.00001

0.00002

Receptor activity

FBXL6

F-box and leucine-rich repeat protein 6

Hs.12271

0.00037

0.00002

0.00003

Ubiquitin cycle

GEFT

RAC/CDC42 exchange factor

Hs.61581

0.00027

0.00002

0.00003

Cell proliferation

KIAA1706

KIAA1706 protein

Hs.412318

0.00034

0.00003

0.00001

DNA binding

KREMEN2

Kringle containing transmembrane protein 2

Hs.73452

0.00043

0.00000

0.00004

Wnt signaling pathway

MEIS4

Likely ortholog of mouse myeloid ecotropic viral integration site-related gene 2

Hs.356135

0.00043

0.00002

0.00004

Transcription regulation

MYEOV

Myeloma overexpressed gene

Hs.436000

0.00048

0.00000

0.00004

Nucleic acid binding

NET1

Neuroepithelial cell transforming gene 1

Hs.25155

0.00100

0.00008

0.00008

Regulation of cell growth

NOS3

Nitric-oxide synthase activity

Hs.511603

0.00027

0.00002

0.00001

Nitric-oxide synthase activity

PARD6G

Par-6 partitioning defective 6 homolog gamma (Caenorhabditis elegans)

Hs.223584

0.00037

0.00001

0.00001

Cytokinesis

PTK2B

Protein tyrosine kinase 2 beta

Hs.438975

0.00094

0.00004

0.00005

Signal transduction

S100A14

S100 calcium binding protein A14

Hs.288998

0.00041

0.00001

0.00003

Calcium ion binding

SMCX

Smcx homolog, X chromosome (mouse)

Hs.103381

0.00066

0.00004

0.00004

Transcription regulation

THBS3

Thrombospondin 3

Hs.169875

0.00046

0.00004

0.00003

Cell-matrix adhesion

UNC93A

Unc-93 homolog A (C. elegans)

Hs.267749

0.00027

0.00000

0.00000

Function unknown

WBSCR21

Williams beuren syndrome chromosome region 21

Hs.182476

0.00043

0.00002

0.00004

Aromatic compound metabolism

  1. aFraction of sequences mapping to UniGene cluster.