Table 1 (A) Overview of the analysed patient microarray data sets. (B) Number of signature genes represented in the microarray data set (number of gene identifiers on the arrays are given between parentheses)

From: Robust prognostic value of a knowledge-based proliferation signature across large patient microarray studies spanning different cancer types

(A) Data set

Cancer site

No. of patients

Source

 

Miller

Breast

251

GEO accession GSE3494: http://www.ncbi.nlm.nih.gov/projects/geo/

 

Wang

Breast

286

GEO accession GSE2034: http://www.ncbi.nlm.nih.gov/projects/geo/

 

Van de Vijver

Breast

295

http://microarray-pubs.stanford.edu/wound_NKI/

 

Zhao

Renal

177

SMD: http://smd.stanford.edu/

 

Beer

Lung

86

http://dot.ped.med.umich.edu:2000/ourimage/pub/Lung/index.html

 

(B) Data set

Signature 1

Signature 2

Wound signature

IGS signature

Miller

455 (1120)

104 (228)

415 (1030)

176 (516)

Wang

350 (667)

87 (158)

346 (614)

131 (270)

Van de Vijver

192 (242)

51 (59)

171 (195)

67 (87)

Zhao

257 (415)

47 (82)

280 (446)

83 (132)

Beer

192 (224)

45 (51)

171 (195)

63 (76)