Table 2 Overexpressed proteins detected by proteomic analyses

From: Expansion of CD133+ colon cancer cultures retaining stem cell properties to enable cancer stem cell target discovery

Protein

Average ratio of overexpression a (s.d.)

Peptide detected

CD166

5.7 (1.6)

TVNSLNVSAISIPEHDEADEISDENR

  

IIISPEENVTLTCTAENQLER

  

LGDCISEDSYPDGNITWYR

Biglycan

22.1 (2.6)

MIENGSLSFLPTLR

  

LLQVVYLHSNNITK

CD44

39.6

AFNSTLPTMAQMEK

Cadherin 17

3.8 (1.2)

APKPVEMVENSTDPHPIK

  

KQDTPQYNLTIEVSDKDFK

  

GPHFTFSLGSGSLQNDWEVSKINGTHAR

CEACAM5

3.8 (1.3)

LQLSNGNRTLTLFNVTR

  

NSGLYTCQANNSASGHSR

  

RSDSVILNVLYGPDAPTISPLNTSYR SDSVILNVLYGPDAPTISPLNTSYR TLTLFNVTRNDTASYK

  

ITPNNNGTYACFVSNLATGR

CD29

28.4

SAVGTLSANSSNVIQLIIDAYNSLSSEVILENGK

CD133

4.8 (3.8)

LPIQDILSAFSVYVNNTESYIHR

  

ILASLDFAQNFITNNTSSVIIEETKK

  1. aOverexpression ratio was calculated using normalised intensities of each peptide detected in spheroid vs primary cell (before cultivation) samples.
Back to article page