Skip to main content

Thank you for visiting nature.com. You are using a browser version with limited support for CSS. To obtain the best experience, we recommend you use a more up to date browser (or turn off compatibility mode in Internet Explorer). In the meantime, to ensure continued support, we are displaying the site without styles and JavaScript.

Advertisement

British Journal of Cancer
  • View all journals
  • Search
  • My Account Login
  • Content Explore content
  • About the journal
  • Publish with us
  • Sign up for alerts
  • RSS feed
  1. nature
  2. british journal of cancer
  3. regular article
  4. article
Detection of the PAX3-FKHR fusion gene in paediatric rhabdomyosarcoma: a reproducible predictor of outcome?
Download PDF
Download PDF
  • Regular Article
  • Open access
  • Published: 11 September 2001

Detection of the PAX3-FKHR fusion gene in paediatric rhabdomyosarcoma: a reproducible predictor of outcome?

  • J Anderson1 nAff7,
  • T Gordon1,2,
  • A McManus1,2,
  • T Mapp3,
  • S Gould5,
  • A Kelsey6,
  • H McDowell4,
  • R Pinkerton1,
  • J Shipley2 &
  • K Pritchard-Jones1 on behalf of
  • (on behalf of the UK Children's Cancer Study Group (UKCCSG) and the UK Cancer Cytogenetics Group)

British Journal of Cancer volume 85, pages 831–835 (2001)Cite this article

  • 1504 Accesses

  • 98 Citations

  • Metrics details

This article has been updated

Abstract

Rhabdomyosarcoma has 2 major histological subtypes, embryonal and alveolar. Alveolar histology is associated with the fusion genes PAX3-FKHR and PAX7-FKHR. Definition of alveolar has been complicated by changes in terminology and subjectivity. It is currently unclear whether adverse clinical behaviour is better predicted by the presence of these fusion genes or by alveolar histology. We have determined the presence of the PAX3/7-FKHR fusion genes in 91 primary rhabdomyosarcoma tumours using a combination of classical cytogenetics, FISH and RT-PCR, with a view to determining the clinical characteristics of tumours with and without the characteristic translocations. There were 37 patients with t(2;13)/PAX3-FKHR, 8 with t(1;13) PAX7-FKHR and 46 with neither translocation. One or other of the characteristic translocations was found in 31/38 (82%) of alveolar cases. Univariate survival analysis revealed the presence of the translocation t(2;13)/PAX3-FKHR to be an adverse prognostic factor. With the difficulties in morphological diagnosis of alveolar rhabdomyosarcoma on increasingly used small needle biopsy specimens, these data suggest that molecular analysis for PAX3-FKHR will be a clinically useful tool in treatment stratification in the future. This hypothesis requires testing in a prospective study. Variant t(1;13)/PAX7-FKHR appears biologically different, occurring in younger patients with more localised disease. © 2001 Cancer Research Campaign http://www.bjcancer.com

Similar content being viewed by others

Immunohistochemical detection of PAX-FOXO1 fusion proteins in alveolar rhabdomyosarcoma using breakpoint specific monoclonal antibodies

Article 09 December 2020

Pax3 loss of function delays tumour progression in kRAS-induced zebrafish rhabdomyosarcoma models

Article Open access 13 October 2022

PAX3/7-FOXO1 fusion-negative alveolar rhabdomyosarcoma in Schuurs-Hoeijmakers syndrome

Article 02 August 2021

Article PDF

Change history

  • 16 November 2011

    This paper was modified 12 months after initial publication to switch to Creative Commons licence terms, as noted at publication

References

  • Anderson J, Renshaw J, McManus A, Carter R, Mitchell C, Adams S and Pritchard-Jones K (1997) Amplification of the t(2; 13) and t(1; 13) translocations of alveolar rhabdomyosarcoma in small formalin-fixed biopsies using a modified reverse transcriptase polymerase chain reaction. Am J Pathol 150: 477–482

    CAS  PubMed  PubMed Central  Google Scholar 

  • Bennicelli JL, Fredericks WJ, Wilson RB, Rauscher FJ 3rd and Barr FG (1995) Wild type PAX3 protein and the PAX3-FKHR fusion protein of alveolar rhabdomyosarcoma contain potent, structurally distinct transcriptional activation domains. Oncogene 11: 119–130

    CAS  PubMed  Google Scholar 

  • Biegel JA, Nycum LM, Valentine V, Barr FG and Shapiro DN (1995) Detection of the t(2;13)(q35;q14) and PAX3-FKHR fusion in alveolar rhabdomyosarcoma by fluorescence in situ hybridization. Genes Chromosomes Cancer 12: 186–192

    Article  CAS  PubMed  Google Scholar 

  • Bown NP, Reid MM, Malcolm AJ, Davison EV, Craft AW and Pearson AD (1994) Cytogenetic abnormalities of small round cell tumours. Med Pediatr Oncol 23: 124–129

    Article  CAS  PubMed  Google Scholar 

  • Crist W, Gehan EA, Ragab AH, Dickman PS, Donaldson SS, Fryer C, Hammond D, Hays DM, Herrmann J and Heyn R et al (1995) The Third Intergroup Rhabdomyosarcoma Study. J Clin Oncol 13: 610–630

    Article  CAS  PubMed  Google Scholar 

  • Crist WM, Garnsey L, Beltangady MS, Gehan E, Ruymann F, Webber B, Hays DM, Wharam M and Maurer HM (1990) Prognosis in children with rhabdomyosarcoma: a report of the intergroup rhabdomyosarcoma studies I and II. Intergroup Rhabdomyosarcoma Committee [see comments]. J Clin Oncol 8: 443–452

    Article  CAS  PubMed  Google Scholar 

  • Davis RJ, D’Cruz CM, Lovell MA, Biegel JA and Barr FG (1994) Fusion of PAX7 to FKHR by the variant t(1;13)(p36;q14) translocation in alveolar rhabdomyosarcoma. Cancer Res 54: 2869–2872

    CAS  PubMed  Google Scholar 

  • Douglass EC, Shapiro DN, Valentine M, Rowe ST, Carroll AJ, Raney RB, Ragab AH, Abella SM and Parham DM (1993) Alveolar rhabdomyosarcoma with the t(2;13): cytogenetic findings and clinicopathologic correlations. Med Pediatr Oncol 21: 83–87

    Article  CAS  PubMed  Google Scholar 

  • Downing JR, Khandekar A, Shurtleff SA, Head DR, Parham DM, Webber BL, Pappo AS, Hulshof MG, Conn WP and Shapiro DN (1995) Multiplex RT-PCR assay for the differential diagnosis of alveolar rhabdomyosarcoma and Ewing’s sarcoma. Am J Pathol 146: 626–634

    CAS  PubMed  PubMed Central  Google Scholar 

  • Galili N, Davis RJ, Fredericks WJ, Mukhopadhyay S, Rauscher FJD, Emanuel BS, Rovera G and Barr FG (1993) Fusion of a fork head domain gene to PAX3 in the solid tumour alveolar rhabdomyosarcoma [published erratum appears in Nat Genet 1994 Feb; 6(2): 214]. Nat Genet 5: 230–235

    Article  CAS  PubMed  Google Scholar 

  • Gordon AT, McManus A, Anderson J, Min T, Swansbury J, Pritchard-Jones K and Shipley J (2001) Cytogenetic Abnormalities in 42 Rhabdomyosarcoma. A United Kingdom Cancer Cytogenetics Group Study. Med Ped Oncol 36: 259–267

    Article  CAS  Google Scholar 

  • Kelly KM, Womer RB, Sorensen PH, Xiong QB and Barr FG (1997) Common and variant gene fusions predict distinct clinical phenotypes in rhabdomyosarcoma. J Clin Oncol 15: 1831–1836

    Article  CAS  PubMed  Google Scholar 

  • McManus AP, Min T, Swansbury GJ, Gusterson BA, Pinkerton CR and Shipley JM (1996a) der(16)t(1;16)(q21;q13) as a secondary change in alveolar rhabdomyosarcoma. A case report and review of the literature. Cancer Genet Cytogenet 87: 179–181

    Article  CAS  PubMed  Google Scholar 

  • McManus AP, O’Reilly MA, Jones KP, Gusterson BA, Mitchell CD, Pinkerton CR and Shipley JM (1996b) Interphase fluorescence in situ hybridization detection of t(2;13)(q35;q14) in alveolar rhabdomyosarcoma–a diagnostic tool in minimally invasive biopsies. J Pathol 178: 410–414

    Article  CAS  PubMed  Google Scholar 

  • Pinkerton CR, Groot-Loonen J, Barrett A, Meller ST, Tait D, Ashley S and McElwain TJ (1991) Rapid VAC high dose melphalan regimen, a novel chemotherapy approach in childhood soft tissue sarcomas. Br J Cancer 64: 381–385

    Article  CAS  PubMed  PubMed Central  Google Scholar 

  • Roberts P, Browne CF, Lewis IJ, Bailey CC, Spicer RD, Williams J and Batcup G (1992) 12q13 abnormality in rhabdomyosarcoma. A nonrandom occurrence?. Cancer Genet Cytogenet 60: 135–140

    Article  CAS  PubMed  Google Scholar 

  • Scrable H, Witte D, Shimada H, Seemayer T, Sheng WW, Soukup S, Koufos A, Houghton P, Lampkin B and Cavenee W (1989) Molecular differential pathology of rhabdomyosarcoma. Genes Chromosomes Cancer 1: 23–35

    Article  CAS  PubMed  Google Scholar 

  • Tsokos M, Webber BL, Parham DM, Wesley RA, Miser A, Miser JS, Etcubanas E, Kinsella T, Grayson J and Glatstein E et al (1992) Rhabdomyosarcoma. A new classification scheme related to prognosis. Arch Pathol Lab Med 116: 847–855

    CAS  PubMed  Google Scholar 

  • Valentine M, Douglass EC and Look AT (1989) Closely linked loci on the long arm of chromosome 13 flank a specific 2;13 translocation breakpoint in childhood rhabdomyosarcoma. Cytogenet Cell Genet 52: 128–132

    Article  CAS  PubMed  Google Scholar 

  • Weber-Hall S, McManus A, Anderson J, Nojima T, Abe S, Pritchard-Jones K and Shipley J (1996) Novel formation and amplification of the PAX7-FKHR fusion gene in a case of alveolar rhabdomyosarcoma. Genes Chromosomes Cancer 17: 7–13

    Article  CAS  PubMed  Google Scholar 

  • Yule SM, Bown N, Malcolm AJ, Reid MM and Pearson AD (1995) Solid alveolar rhabdomyosarcoma with a t(2;13). Cancer Genet Cytogenet 80: 107–109

    Article  CAS  PubMed  Google Scholar 

Download references

Author information

Author notes
  1. J Anderson

    Present address: Unit of Molecular Haematology and Oncology, Institute of Child Health, Guilford Street, London, WC1N 1EH, UK

Authors and Affiliations

  1. Section of Paediatric Oncology, Section of Molecular Carcinogenesis, Institute of Cancer Research, Sutton, Surrey, UK

    J Anderson, T Gordon, A McManus, R Pinkerton & K Pritchard-Jones

  2. Section of Molecular Cytogenetics Team, Section of Molecular Carcinogenesis, Institute of Cancer Research, Sutton, Surrey, UK

    T Gordon, A McManus & J Shipley

  3. United Kingdom Children’s Cancer Study Group, Leicester, UK

    T Mapp

  4. Alder Hey Children’s Hospital, Liverpool, UK

    H McDowell

  5. John Radcliffe Hospital, Oxford, UK

    S Gould

  6. Manchester Children’s Hospital, Manchester, UK

    A Kelsey

Authors
  1. J Anderson
    View author publications

    Search author on:PubMed Google Scholar

  2. T Gordon
    View author publications

    Search author on:PubMed Google Scholar

  3. A McManus
    View author publications

    Search author on:PubMed Google Scholar

  4. T Mapp
    View author publications

    Search author on:PubMed Google Scholar

  5. S Gould
    View author publications

    Search author on:PubMed Google Scholar

  6. A Kelsey
    View author publications

    Search author on:PubMed Google Scholar

  7. H McDowell
    View author publications

    Search author on:PubMed Google Scholar

  8. R Pinkerton
    View author publications

    Search author on:PubMed Google Scholar

  9. J Shipley
    View author publications

    Search author on:PubMed Google Scholar

  10. K Pritchard-Jones
    View author publications

    Search author on:PubMed Google Scholar

Consortia

(on behalf of the UK Children's Cancer Study Group (UKCCSG) and the UK Cancer Cytogenetics Group)

Rights and permissions

From twelve months after its original publication, this work is licensed under the Creative Commons Attribution-NonCommercial-Share Alike 3.0 Unported License. To view a copy of this license, visit http://creativecommons.org/licenses/by-nc-sa/3.0/

Reprints and permissions

About this article

Cite this article

Anderson, J., Gordon, T., McManus, A. et al. Detection of the PAX3-FKHR fusion gene in paediatric rhabdomyosarcoma: a reproducible predictor of outcome?. Br J Cancer 85, 831–835 (2001). https://doi.org/10.1054/bjoc.2001.2008

Download citation

  • Received: 20 November 2000

  • Revised: 29 May 2001

  • Accepted: 03 July 2001

  • Published: 11 September 2001

  • Issue date: 14 September 2001

  • DOI: https://doi.org/10.1054/bjoc.2001.2008

Share this article

Anyone you share the following link with will be able to read this content:

Sorry, a shareable link is not currently available for this article.

Provided by the Springer Nature SharedIt content-sharing initiative

Keywords

  • rhabdomyosarcoma
  • prognosis
  • translocation

This article is cited by

  • Oncogenic role of HMGA2 in fusion-negative rhabdomyosarcoma cells

    • Kazutaka Ouchi
    • Mitsuru Miyachi
    • Hajime Hosoi

    Cancer Cell International (2020)

  • OLIG2 is a novel immunohistochemical marker associated with the presence of PAX3/7-FOXO1 translocation in rhabdomyosarcomas

    • Magdalena Kaleta
    • Anna Wakulińska
    • Maria Łastowska

    Diagnostic Pathology (2019)

Download PDF

Advertisement

Explore content

  • Research articles
  • Reviews & Analysis
  • News & Comment
  • Current issue
  • Collections
  • Follow us on Twitter
  • Sign up for alerts
  • RSS feed

About the journal

  • Journal Information
  • Open access publishing
  • About the Editors
  • Contact
  • Special Issues
  • For Advertisers
  • Subscribe

Publish with us

  • For Authors & Referees
  • Language editing services
  • Submit manuscript

Search

Advanced search

Quick links

  • Explore articles by subject
  • Find a job
  • Guide to authors
  • Editorial policies

British Journal of Cancer (Br J Cancer)

ISSN 1532-1827 (online)

ISSN 0007-0920 (print)

nature.com sitemap

About Nature Portfolio

  • About us
  • Press releases
  • Press office
  • Contact us

Discover content

  • Journals A-Z
  • Articles by subject
  • protocols.io
  • Nature Index

Publishing policies

  • Nature portfolio policies
  • Open access

Author & Researcher services

  • Reprints & permissions
  • Research data
  • Language editing
  • Scientific editing
  • Nature Masterclasses
  • Research Solutions

Libraries & institutions

  • Librarian service & tools
  • Librarian portal
  • Open research
  • Recommend to library

Advertising & partnerships

  • Advertising
  • Partnerships & Services
  • Media kits
  • Branded content

Professional development

  • Nature Awards
  • Nature Careers
  • Nature Conferences

Regional websites

  • Nature Africa
  • Nature China
  • Nature India
  • Nature Japan
  • Nature Middle East
  • Privacy Policy
  • Use of cookies
  • Legal notice
  • Accessibility statement
  • Terms & Conditions
  • Your US state privacy rights
Springer Nature

© 2025 Springer Nature Limited