Table 1 Mutations identified by next-generation sequencing in APLs

From: Acute promyelocytic leukemias share cooperative mutations with other myeloid-leukemia subgroups

Cases

Mutations

Study

 

nsSNVs

Indels

SJMs

Total

 

Mouse APLs

 mAPL#Mi1

0

0

0

0

Present

 mAPL#Mi2

1

0

0

1

Present

 mAPL#Mi3

9

1

0

10

Present

 mAPL#Mi4

6

1

0

7

Present

 mAPL#Mi5

0

0

0

0

Present

 mAPL

3

0

0

3

Wartman et al.4

 Total mutations (per Pt.)

19 (3.16)

2 (0.33)

0

21 (3.50)

6 cases total

Human APLs

 hAPL#Mi1

5

0

0

5

Present

 hAPL#Mi2

13

3

0

16

Present

 hAPL#Mi3

2

1

0

3

Present

 hAPL#Mi4

3

3

0

6

Present

 hAPL#Mi5

0

0

0

0

Present

 hAPL#Mi6

5

1

0

6

Present

 hAPL#Mi7

12

2

0

14

Present

 hAPL#Mi8

1

1

0

2

Present

 hAPL#Mi9

4

1

0

5

Present

 hAPL#Mi10

7

1

0

8

Present

 hAPL#Mi11

7

1

0

8

Present

 hAPL#1

5

2

0

7

Greif et al.5

 hAPL#2

3

0

0

3

Greif et al.5

 hAPL#3

4

0

0

4

Greif et al.5

 hAPL

12

0

0

12

Welch et al.6

 TCGA-AB-2803

12

1

0

13

TCGA7

 TCGA-AB-2804

7

1

0

8

TCGA7

 TCGA-AB-2823

0

1

0

1

TCGA7

 TCGA-AB-2840

0

1

0

1

TCGA7

 TCGA-AB-2841

4

0

0

4

TCGA7

 TCGA-AB-2862

7

0

0

7

TCGA7

 TCGA-AB-2872

9

1

0

10

TCGA7

 TCGA-AB-2897

5

0

1

6

TCGA7

 TCGA-AB-2905

15

2

0

17

TCGA7

 TCGA-AB-2906

9

1

0

10

TCGA7

 TCGA-AB-2980

3

1

0

4

TCGA7

 TCGA-AB-2982

1

1

0

2

TCGA7

 TCGA-AB-2991

10

0

0

10

TCGA7

 TCGA-AB-2994

6

1

0

7

TCGA7

 TCGA-AB-2997

9

1

0

10

TCGA7

 TCGA-AB-2998

4

1

0

5

TCGA7

 TCGA-AB-2999

9

0

0

9

TCGA7

 TCGA-AB-3001

8

0

2

10

TCGA7

 TCGA-AB-3007

5

1

1

7

TCGA7

 TCGA-AB-3012

6

2

1

9

TCGA7

 Total in hAPLs (per Pt.)

212 (6.06)

32 (0.91)

5 (0.14)

249 (7.11)

35 cases

Total h+mAPLs (per Pt.)

231 (5.63)

34 (0.83)

5 (0.12)

270 (6.59)

41 cases

  1. Abbreviations: APL, acute promyelocytic leukemia; h, human; indels, small insertion/deletions; m, mouse; nsSNV, non-synonymous single nucleotide variant; per Pt., per patient; SJM, splice junction mutation; TCGA, The Cancer Genome Atlas.