Table 1 Known prostate cancer risk SNPs successfully tested in this study

SNP	Chr.	Gene	Alleles (Maj/Min)	MAF	Prev. OR	Citation
rs721048	2	EHBP1	G/A	0.19	1.15	Gudmundsson et al (2008)
rs2660753	3	CHMP2B; POU1F1	C/T	0.11	1.18	Eeles et al (2008)
rs9364554	6	SLC22A3; SLC22A2; LPAL2; LPA	C/T	0.29	1.17	Eeles et al (2008)
rs10486567	7	JAZF1	G/A	0.23	0.74	Thomas et al (2008)
rs6465657	7	LMTK2; BHLHB8	T/C	0.46	1.12	Eeles et al (2008)
rs7008482	8	—	T/G	0.83	1.8	Robbins et al (2007)
rs1016343	8	—	C/T	0.18	1.37	Eeles et al (2008)
rs13254738	8	—	A/C	0.34	1.11	Haiman et al (2007)
rs16901979	8	—	C/A	0.031	1.79	Gudmundsson et al (2007a)
rs6983267	8	—	G/T	0.50	0.8	Yeager et al (2007)
rs7000448	8	—	C/T	0.39	1.14	Haiman et al (2007)
rs4242382	8	—	G/A	0.12	1.41	Thomas et al (2008)
rs4242384	8	—	A/C	0.09	1.88	Eeles et al (2008)
rs7920517	10	MSMB	G/A	0.48	0.82	Eeles et al (2008)
rs10993994	10	MSMB	T/C	0.60	0.8	Eeles et al (2008)
rs4962416	10	CTBP2	T/C	0.27	1.2	Thomas et al (2008)
rs7931342	11	—	G/T	0.49	0.84	Eeles et al (2008)
rs10896449	11	—	G/A	0.48	0.78	Thomas et al (2008)
rs4430796	17	TCF2	G/A	0.49	1.24	Gudmundsson et al (2007b)
rs7501939	17	TCF2	C/T	0.42	0.83	Gudmundsson et al (2007b)
rs1859962	17	—	G/T	0.54	0.8	Gudmundsson et al (2007b)
rs2735839	19	KLK2; KLK3	G/A	0.15	0.83	Eeles et al (2008)
rs5945572	X	NUDT11; NUDT10	G/A	0.35	1.24	Gudmundsson et al (2008)

Abbreviations: alleles=major/minor alleles; chr.=chromosome; gene=nearby gene as reported in the cited literature; MAF=allele frequency in the controls of the cited paper for the minor allele as observed in the Ashkenazi Jewish population; prev. OR=previous odds ratio for the SNP as cited by the given paper; SNP=single nucleotide polymorphism.
When MAF is >0.5, it indicates that the minor allele in the Ashkenazi Jewish population is the major allele in the study that initially reported the SNP.

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