Table 1 Summary of the kConFab and AOCS study populations

From: Estimating single nucleotide polymorphism associations using pedigree data: applications to breast cancer

 

Study

 

kConFab

AOCS

n

45 822

897

 Males/female

23 415/22 407

0/897

 Pedigrees

736

897

 Unaffected/affected

42 709/3113

897/0

 Unaffected/affected (females only)

19 294/3113

897/0

n genotyped (at least one SNP)

6010

897

 Male/female

1673/4337

0/897

 Unaffected/affected

4420/1590

897/0

 Unaffected/affected (females only)

2747/1590

897/0

n genotyped (22 risk prediction SNPs)

574

715

 Male/female

14/560

0/715

 Unaffected/affected

79/495

0/715

 Unaffected/affected (females only)

65/495

0/715

n genotyped (all 24 SNPs)

564

714

 Male/female

14/550

0/714

 Unaffected/affected

79/485

0/714

 Unaffected/affected (females only)

65/485

0/714

Mean (s.d.) censoring age (unaffected)

45.00 (23.75)

57.37 (11.62)

 Censored aged 18 years

52.29 (18.83)

57.37 (11.62)

 Females only

38.41 (27.10)

57.37 (11.62)

 Females censored aged 18 years

51.90 (19.23)

57.37 (11.62)

Mean (s.d.) censoring age (affected)

51.50 (12.12)

N/A

 Censored aged 18 years

51.50 (12.12)

N/A

 Females only

51.50 (12.12)

N/A

 Females censored aged 18 years

51.50 (12.12)

N/A

  1. Abbreviations: AOCS=Australian Ovarian Cancer Study; kConFab=Kathleen Cuningham Foundation Consortium for Research into Familial Breast Cancer; n=number of individuals in sample.
  2. Censoring age in years.