Table 1 Upregulated genes in MSCs co-cultured with TIL and M38 compared with MSCs cultured alone
TIL+M38 MSC | MSC co-culture with TIL plus M38 compared with MSC mono-cultures | MSC |
|---|---|---|
Gene | Fold change | P value |
CXCL9 | 183.21 | 2.17E−23 |
IDO1 | 114.69 | 3.27E−29 |
CXCL11 | 64.71 | 1.1E−14 |
CCL13 | 55.67 | 1.95E−18 |
CCL8 | 44.32 | 4.34E−21 |
CXCL10 | 35.67 | 1.21E−14 |
ICAM1 | 34.60 | 4.71E−13 |
CCL7 | 25.49 | 3.95E−10 |
CCL2 | 24.41 | 6.05E−11 |
TLR3 | 21.27 | 3.81E−19 |
CCL5 | 20.93 | 2.39E−10 |
IRF1 | 11.25 | 1.19E−17 |
GZMA | 9.57 | 9.55E−06 |
HLA-G | 8.30 | 5.56E−14 |
CXCL2 | 8.00 | 1.35E−08 |
IRF8 | 7.07 | 2.21E−06 |
IL-15 | 6.82 | 1.86E−18 |
IL-1B | 6.38 | 0.00013 |
CXCL1 | 6.00 | 0.001554 |
CXCL16 | 5.03 | 7.51E−12 |
ICAM4 | 4.92 | 2.01E−10 |
IL-7 | 4.73 | 1.19E−08 |
CXCL3 | 4.69 | 8.95E−05 |
IL12A | 4.25 | 3.64E−07 |
STAT2 | 4.05 | 1.24E−15 |
STAT1 | 3.85 | 3.86E−19 |
IL17C | 3.73 | 9.2E−06 |
IRF2 | 3.57 | 1.04E−11 |
IRF7 | 3.50 | 3.76E−11 |
CCL22 | 3.37 | 1.8E−08 |
TLR4 | 2.93 | 3.19E−10 |
IL32 | 2.89 | 0.002099 |
IDO2 | 2.84 | 0.000233 |
IL-6 | 2.73 | 1.75E−08 |
CXCR3 | 2.68 | 3.28E−09 |
IRF9 | 2.53 | 1.63E−16 |
VCAM1 | 2.50 | 4.03E−05 |
GZMB | 2.49 | 0.001454 |
CCR1 | 2.46 | 0.000189 |
CCL4 | 2.42 | 0.002967 |
CCL26 | 2.13 | 0.001105 |
VEGFC | 2.05 | 1.58E−07 |