Table 2 Summary of MRR with >50% of the samples altered of the CLX data set
Chromosome | Cytoband | Start | End | Number of MRR contained | % Median samples altered in CLX | Number of MRR contained in TCGA | % Samples altered in TCGA | Genes included in the region |
|---|---|---|---|---|---|---|---|---|
1 | 1p31.1 | 72 771 355 | 72 779 078 | 5 | 52 | 4 | 54 | |
1 | 1p13.3 | 110 233 315 | 110 234 397 | 3 | 51 | 3 | 63 | GSTM1 |
1 | 1q21.3 | 152 555 783 | 152 586 104 | 10 | 51 | 10 | 65 | |
3 | 3q29 | 192 880 714 | 192 882 890 | 5 | 56 | 6 | 74 | |
4 | 4p16.1 | 10 214 160 | 10 234 595 | 16 | 63 | 27 | 73 | |
5 | 5p11 | 46 271 918 | 46 273 489 | 2 | 52 | 3 | 55 | |
5 | 5q11.2 | 57 326 015 | 57 333 502 | 16 | 59 | 22 | 52 | |
8 | 8p11.22 | 39 246 663 | 39 386 952 | 22 | 64 | 25 | 47 | ADAM5, ADAM3A |
8 | 8q23.2 | 112 295 069 | 112 295 247 | 2 | 56 | 3 | 67 | |
12 | 12p13.31 | 9 637 897 | 9 690 962 | 5 | 53 | 7 | 61 | |
13 | 13q21.31 | 72 479 535 | 72 480 543 | 1 | 57 | 1 | 51 | |
17 | 17q21.2 | 39 423 091 | 39 430 518 | 12 | 58 | 15 | 46 | |
20 | 20p13 | 1 561 568 | 1 582 194 | 17 | 54 | 20 | 51 | SIRRPB1 |
