Table 5 Pathological characteristics of the 13 unclassifiable cases with positive EWSR1 rearrangement on FISH

From: The spectrum of EWSR1-rearranged neoplasms at a tertiary sarcoma centre; assessing 772 tumour specimens and the value of current ancillary molecular diagnostic modalities

Case no.

Age/sex/site

Pathology

1

33/M/shoulder

Fascicular spindle to focally more polygonal cell tumour; moderate to marked atypia. Extensive necrosis and mitoses. CD34+ in most cells; focal nuclear S100 protein+, very focal AE1/AE3, CD99 and EMA

Final interpretation: ‘Sarcoma NOS’

2

47/F/foot

Multinodular spindle and polygonal cell tumour. Focal rhabdoid features and hemangiopericytic pattern. bcl-2, INI1 and focally CD99+, very focal S100 protein+

Final interpretation: ‘Findings not conclusive. Spindle cell sarcoma NOS; possible myoepithelial tumour, MPNST or extraskeletal myxoid chondrosarcoma’

3

52/M/shoulder

Small ovoid cells separated by fibrous septa. Largely solid; focal myxoid change. Focal necrosis and prominent mitoses. Focal EMA; all other markers negative. Features inconclusive for myoepithelial carcinoma. Some areas resembling EMC

Final interpretation: ‘Malignant neoplasm, unclassifiable’

4

56/M/shoulder

Spindle and ovoid cell neoplasm, focal myxoid change, microcyst formation. Focal CD34, bcl-2 and CD99+ Final interpretation: ‘Findings not conclusive. Some MLPS-like features. Possibly solitary fibrous tumour’

5

11/M/subcutis of forearm

Moderately circumscribed lesion of plump ovoid and spindle cells with elongated cytoplasmic processes in myxoid stroma. No significant pleomorphism or necrosis. EMA, INI1 and focal D2-40+; claudin-1, cytokeratin and CD34−

Final interpretation: Features resembling epithelioid perineurioma but immunophenotype not wholly supportive. Possible EMC

6

54/M/kidney

Fascicular spindle cell tumour; moderate atypia; focal necrosis and prominent mitoses. Focal nuclear S100 protein, AE1/AE3, CD99, CD56 and CD34+

Final interpretation: ‘High-grade spindle cell sarcoma’

7

27/M/oropharynx

Epithelioid cells with mild atypia in nests in hyalinised or basement membrane-like stroma; basaloid cells also present. Diffuse strong MNF116, EMA, CK5/6, CK14 and p63+. CD10 and calponin+in peripheral cells

Final interpretation: ‘Probable myoepithelial neoplasm without identifiable partner gene’

8

57/F/neck

Small to medium-sized epithelioid and polygonal cells with spindle cell areas. Up to one mitotic figure in 50 high power fields. Possible foci of adipocytes. Diffuse nuclear S100 protein and p16+; focal desmin and GFAP+. INI1+

Final interpretation: ‘Borderline tumour which cannot be conclusively characterised’

9

69/M/thyroid

Polygonal and spindle cell neoplasm. Focal variable FLI1, INI1, TLE1, CD56, CD99 and bcl-2+

Final interpretation: ‘Polygonal and spindle cell tumour of indeterminate (probably mesenchymal) lineage, but not otherwise classifiable. Does not fit into any specific class of EWSR1-rearranged neoplasm’

10

82/M/neck

Focally necrotic polygonal cell tumour. S100 protein, synaptophysin and weak focal EMA and chromogranin+

No detectable EWSR1-CREB1 or EWSR1-ATF1 fusions with RT–PCR. No BRAF mutation detected

11

64/F/not available

Focally infiltrative biphasic neoplasm with bland spindle cells and epithelioid component, with occasional mitoses but no necrosis. Epithelioid component positive for CK7 and EMA

Final interpretation: ‘Possible myoepithelial neoplasm’

12

34/M/spinal cord

Infiltrative tumour composed of ovoid cells in irregular cords within fibrous tissue. Focally EMA+, S100 protein, STAT6 and MUC4−

Final interpretation: ‘Benign mesenchymal neoplasm of uncertain lineage. Possibly myoepithelial tumour but immunophenotype incomplete’

13

60/F/thigh

Myxoid spindle cell tumour; prominent myxoid stroma. Areas of adipocytic differentiation (but morphology not in keeping with myxoid liposarcoma). Occasional mitotic figures; no necrosis. Diffuse S100 protein and p16+; weak focal CDK4+. No DDIT3 rearrangement with FISH

Final interpretation: ‘Myxoid spindle cell sarcoma with adipocytic differentiation’

  1. Abbreviations: DSRCT=desmoplastic small round cell tumour; EMC=extraskeletal myxoid chondrosarcoma; F=female; M=male; MLPS=myxoid liposarcoma; MPNST=malignant peripheral nerve sheath tumour; RT–PCR=reverse transcription–PCR.
  2. NB: Full immunopanels (including pancytokeratins, S100 protein, CD34, desmin and SMA) were performed for each case. Only positive findings are listed in most cases.