Table 1 Gene array analysis

From: Structural and biochemical changes underlying a keratoderma-like phenotype in mice lacking suprabasal AP1 transcription factor function

Ratio: (log2) a TAM67+/TAM67−

Gene name

Entrez gene ID

Description

Category

Gene expression elevated in TAM67-negative epidermis

    

Cutaneous keratins

−4.08

Krt71

56735

Keratin 71

 

−3.64

Krt25

70810

Keratin 25

 

−3.47

Krt27

16675

Keratin 27

 

−3.47

Krt26

320864

Keratin 26

 

−3.04

Krt15

16665

Keratin 15

 

−3.02

Krt28

70843

Keratin 28

 

−2.88

Krt72

105866

Keratin 72

 

−2.41

Krt77

406220

Keratin 77

 

−2.37

Krt73

406220

Keratin 73

 

−2.32

Krt23

94179

Keratin 23

 

−2.13

Krt78

332131

Keratin 78

 
    

Hair keratins and associated proteins

−3.66

Krt33a

71888

Keratin 33a

 

−3.19

Krt86

 

Keratin 86

 

−2.47

Krt31

16660

Keratin 31

 

−4.43

Krtap7-1

71363

Keratin associated protein 7-1

 

−4.39

Krtap8-1

16703

Keratin associated protein 8-1

 

−3.46

Krtap3-3

66380

Keratin associated protein 3-3

 

−3.27

Krtap1-5

69664

Keratin associated protein 1-5

 

−3.04

Krtap6-1

100040214

Keratin associated protein 6-1

 

−3.03

Krtap16-8

68484

Keratin associated protein 16-8

 

−2.92

Krtap4-16

435285

Keratin associated protein 4-16

 

−2.91

Krtap4-1

665891

Keratin associated protein 4-1

 

−2.77

Krtap8-2

16704

Keratin associated protein 8-2

 

−2.67

Krtap13-1

268905

Keratin associated protein 13-1

 

−2.64

Krtap6-3

 

Keratin associated protein 6-3

 

−2.57

Krtap4-7

76444

Keratin associated protein 4-7

 

−2.23

Krtap1-4

629873

Keratin associated protein 1-4

 

−2.03

Krtap4-2

68673

Keratin associated protein 4-2

 

−1.83

Krtap3-1

69473

Keratin associated protein 3-1

 

−1.83

Krtap16-7

170656

Keratin associated protein 16-7

 

−1.80

Krtap3-2

66380

Keratin associated protein 3-2

 

−1.77

Krtap1-3

435273

Keratin associated protein 1-3

 

−1.70

Krtap16-5

77918

Keratin associated protein 16-5

 
    

Early envelope

−1.8

Sprr4

229562

Small protein-rich protein 4

 
    

Late envelope

−3.97

Lce1m

66203

Late cornified envelope 1M

 

−3.83

Lce1d

69611

Late cornified envelope 1D

 

−3.79

Lce1a2

73722

Late cornified envelope 1A2

 

−3.73

Lce6a

78382

Late cornified envelope 6A

 

−3.56

Lce1f

67828

Late cornified envelope 1F

 

−3.51

Lce1e

68694

Late cornified envelope 1E

 

−3.40

Lce1b

68720

Late cornified envelope 1B

 

−3.37

Kprp

433619

Keratinocyte proline-rich protein

 

−3.23

Lce1l

73730

Late cornified envelope 1L

 

−2.79

Lce1c

73719

Late cornified envelope 1C

 

−2.48

Lce1a1

67127

Late cornified envelope 1A1

 

−2.29

Lce1h

 

Late cornified envelope 1H

 

−2.16

Lce1j

 

Late cornified envelope 1J

 

−2.16

Lce1g

66195

Late cornified envelope 1G

 

−2.67

Lor

16939

Loricrin

 
    

Filaggrin-related proteins

−5.55

Flg2

229574

Filaggrin2

 

−3.53

Tchh

99681

Trichohyalin

 

−2.26

Crnn

381457

Cornulin

 
    

Proteases and protease inhibitors

−3.68

Tmprss11f

243083

Transmembrane protease, serine 11f

 

−3.02

Serpina12

68054

Serine (or cysteine) peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 12

 
    

Lipoxygenases

−3.67

Alox12e

11685

Arachidonate lipoxygenase, epidermal

 

Gene expression elevated in TAM67-positive epidermis

    

Cutaneous keratins

+1.75

Krt6a

16687

Keratin 6a

 

+1.68

Krt16

16666

Keratin 16

 

+1.60

Krt17

16667

Keratin 17

 
    

Early envelope

+2.40

Sprr2b

20756

Small proline-rich protein 2B

 

+2.14

Tgm3

21818

Transglutaminase type III

 

+2.00

Sprr2d

20758

Small proline-rich protein 2D

 

+1.62

Sprr2e

 

Small proline-rich protein 2E

 
    

Proteases and protease inhibitors

+4.19

Serpinb3a

20248

Serine (or cysteine) peptidase inhibitor, clade B (ovalbumin), member 3A

 

+2.51

Serpinb3d

394252

Serine (or cysteine) peptidase inhibitor, clade B (ovalbumin), member 3D

 

+1.80

Serpinb6c

 

Serine (or cysteine) peptidase inhibitor, clade B (ovalbumin), member 6C

 

+2.07

Spink12

78242

Serine peptidase inhibitor, Kazal type 12

 

+2.04

Klk13

626834

Kallikrein related-peptidase 13

 

+1.89

Serpinb2

18788

Plasminogen activator inhibitor 2

 

+1.84

Capn2

12334

Calpain 2

 
    

Envelope defense

+3.82

S100a8

20201

S100A8

 

+3.72

Defb3

27358

Defensin beta 3

 

+3.19

S100a9

20202

S100A9

 

+2.00

Defb4

56519

Defensin beta 4

 
    

Chitinase-like proteins

+4.18

Chi3l4

104183

Chitinase-3-like protein 3

 
    

Desmosome

+1.99

Dsc2

13506

Desmocollin 2

 

+1.91

Dsg3

 

Desmoglein 3

 
  1. Larger negative or positive numbers indicate greater enrichment
  2. aNegative log2 values indicate relative enrichment in TAM67-negative epidermis and positive numbers indicate relative enrichment in TAM67-positive epidermis