Table 1 Number of the detected CpG sites, genes, and MspI-digested fragments in single HepG2 cells
Sample | Unique CpGs (1×) | Unique CpGs (3×) | Genes (FPKM≥0.1) | Genes (FPKM≥1) | MspI-digested fragments |
|---|---|---|---|---|---|
scTrio-HepG2-#1 | 1 834 536 | 1 276 842 | 6 083 | 4 373 | 150 288 |
scTrio-HepG2-#2 | 1 239 255 | 819 238 | 6 440 | 4 746 | 103 892 |
scTrio-HepG2-#3 | 1 217 007 | 709 874 | 6 271 | 5 122 | 104 884 |
scTrio-HepG2-#4 | 1 251 747 | 725 124 | 5 808 | 4 329 | 105 635 |
scTrio-HepG2-#5 | 1 762 799 | 1 201 953 | 6 437 | 4 904 | 145 361 |
scTrio-HepG2-#6 | 1 820 527 | 1 308 313 | 6 036 | 4 702 | 146 772 |
Mean of scTrio-HepG2 | 1 520 979 | 1 006 891 | 6 179 | 4 696 | 126 139 |
scRRBS-HepG2-#1 | 1 336 924 | 780 377 | / | / | 115 853 |
scRRBS-HepG2-#2 | 1 199 569 | 701 340 | / | / | 105 278 |
scRNA-HepG2-#1 | / | / | 6 099 | 4 335 | / |
scRNA-HepG2-#2 | / | / | 6 542 | 4 987 | / |
