Table 2 SNP-based sliding-window analysis of Block 1 showing windows which demonstrated significant (P<0.05) global transmission disequilibrium in the entire resource when analysed using the PDT

From: Erratum: Linkage and association analysis of CACNG3 in childhood absence epilepsy

SNP

      

Frequency in parents (%)

Transmitted

Not transmitted

Sum PDT

Global

AVE PDT

Global

2

3

4

5

6

7

8

   

Z (1d.f.)

P-value

χ 2 (d.f.)

P-value

Z (1d.f.)

P-value

χ 2 (d.f.)

P-value

2

2

     

31.5

202

157

2.34

0.020

9.49(3)

0.024

2.69

0.007

9.39(3)

0.025

2

2

1

    

30.2

180

140

2.16

0.031

16.51(7)

0.021

2.50

0.013

14.59(7)

0.042

 

2

1

    

44.1

255

214

2.51

0.012

9.39(3)

0.025

2.27

0.023

7.13(3)

0.068

 

2

1

1

   

40.0

236

192

2.68

0.007

12.66(6)

0.049

2.46

0.014

9.74(6)

0.136

  

1

1

   

48.4

270

228

2.53

0.011

9.93(3)

0.019

2.22

0.026

7.24(3)

0.065

  

1

1

1

  

42.2

215

170

2.86

0.004

14.24(6)

0.027

2.78

0.006

13.58(6)

0.035

   

1

1

2

 

36.8

203

155

3.07

0.002

20.95(7)

0.004

3.02

0.003

20.79(7)

0.004

   

1

1

2

2

36.3

199

148

3.29

0.001

27.69(12)

0.006

3.33

0.001

27.62(12)

0.006

    

1

2

 

40.2

218

171

3.02

0.003

15.07(3)

0.002

2.95

0.003

14.86(3)

0.002

    

1

2

2

39.4

215

159

3.74

0.000

27.77(6)

0.000

3.49

0.001

25.24(6)

0.000

     

2

2

45.8

270

218

3.06

0.002

16.16(3)

0.001

2.95

0.003

14.88(3)

0.002

  1. Only haplotypes showing significant (P<0.05) overtransmission are shown.
Back to article page