Table 1 List of mutations identified in the SPAST gene in our HSP cohort
No. | Exon/intron | Family no. | Type of mutation | cDNA | Protein | F/S | Onset of phenotype | Pure/complex | Reference/novel |
|---|---|---|---|---|---|---|---|---|---|
1 | Ex 1 | 24227 | Nonsense | c.373G>T | p.Glu125Term | F | >35 | Pure | 11 |
2 | Ex 2 | 25942 | Nonsense | c.499C>T | p.Gln167Term | S | >35 | Pure | Novel |
3 | Ex 3 | 24283 | Insertion | c.549_550insT | p.Asn184Term | F | <35 | Pure | Novel |
4 | Ex 5 | 21987 | Deletion | c.692delC | p.Ala231Valfs Term239 | ? | ? | ? | Novel |
5 | Ex 5 | 19583 | Deletion | c.839_840delAG | p.Gln280Argfs Term289 | F | <35 | Pure | 12 |
6 | Ex 5 | 28146 | Splice | c.870 G>A | Unknown | ? | ? | ? | Novel |
7 | Int 5 | 25961 | Splice | c.870+1G>T | Unknown | ? | ? | ? | Novel |
8 | Ex 6 | 24295 | Insertion | c.981_982insAT | p.Ile328IlefsTerm329 | ? | ? | ? | Novel |
9 | Ex 7 | 21937 | Missense | c.1067A>G | p.Glu356Gly | ? | <10 | ? | 6 |
10 | Ex 7 | 21935 | Missense | c.1081C>T | p.Pro361Ser | F | <35 | Complex (cardiomyopathy) | Novel |
11 | Int 7 | 21971 | Splice/deletion | c.1099-3_1099-1delTAG | Unknown | F | >35 | Pure | Novel |
12 | Ex 8 | 21977 | Deletion | c.1101_1103delGTT | p.Leu367del | F | >35 | Pure | Novel |
13 | Ex 8 | 25902 | Deletion | c.1101_1103delGTT | p.Leu367del | F | <10 | Pure | Novel (2) |
14 | Ex 8 | 24218 | Insertion | c.1115_1116insG | p.Arg372Argfs Term393 | ? | ? | ? | Novel |
15 | Ex 8 | 25945 | Missense | c.1121C>G | p.Pro374Arg | F | <10 | ? | Novel |
16 | Ex 8 | 25946 | Missense | c.1154G>A | p.Gly385Glu | S | >35 | Pure | Novel |
17 | Int 8 | 24292 | Splice | c.1174-1G>T | Unknown | F | <35 | Pure | Novel |
18 | Ex 9 | 21938 | Missense | c.1196C>T | p.Ser399Leu | F | ? | ? | 34 |
19 | Ex 9 | 24224 | Missense | c.1196C>T | p.Ser399Leu | ? | ? | ? | 34 |
20 | Ex 9 | 19576 | Deletion | c.1202delC | p.Ala401GlufsTerm406 | ? | ? | ? | Novel |
21 | Ex 9 | 24286 | Deletion | c.1215_1219delTATAA | p.Asn405LysfsTerm440 | S | >35 | Pure | 8 |
22 | Ex 9 | 24268 | Missense | c.1216A>G | p.Ile406Val | F | <35 | Pure | 35 |
23 | Ex 9 | 21901 | Deletion | c.1245delC | p.Tyr415Term | S | >35 | Pure | Novel |
24 | Int 9 | 24248 | Splice | c.1245+1G>T | Unknown | F | <10 | Pure | 36 |
25 | Ex 10 | 24231 | Missense | c.1250G>A | p.Gly417Glu | F | <35 | Complicated (cognitive impairment) | Novel |
26 | Ex 10 | 19582 | Missense | c.1280T>G | p.Phe427Cys | F | >35 | Pure | Novel |
27 | Ex 10 | 24233 | Deletion | c.1281delT | p.Phe427Leufs Term437 | ? | ? | ? | 37 |
28 | Ex 10 | 24212 | Nonsense | c.1291C>T | p.Arg431Term | F | >35 | Pure | 8 |
29 | Ex 11 | 19593 | Missense | c.1339T>G | p.Leu447Val | F | >35 | Pure | Novel |
30 | Ex 11 | 21214 | Missense | c.1378.C>T | p.Arg460Cys | F | >35 | Complicated (polyneuropathy) | 38 |
31 | Ex 11 | 24222 | Missense | c.1378C>T | p.Arg460Cys | ? | <10 | ? | |
32 | Ex 11 | 24285 | Missense | c.1378C>T | p.Arg460Cys | F | <35 | Pure | 38 |
33 | Ex 11 | 24228 | Missense | c.1379G>A | p.Arg460His | F | <35 | Pure | Novel |
34 | Ex 12 | 25910 | Nonsense | c.1417C>T | p.Gln473Term | F | <10 | Autonomic nervous system | Novel |
35 | Ex 12 | 24255 | Insertion | c.1462_1463insTA | p.Arg488IlefsTerm530 | F | >35 | Pure | Novel |
36 | Ex 13 | 25923 | Missense | c.1495C>T | p.Arg499Cys | F | <10 | Pure | 7 |
37 | Ex 13 | 21929 | Missense | c.1496G>A | p.Arg499His | F | <10 | Trunk ataxia | 39 |
38 | Ex 13 | 19598 | Missense | c.1507C>T | p.Arg503Trp | ? | ? | ? | 14 |
39 | Ex 14 | 21900 | Missense | c.1540A>G | p.Arg514Gly | F | ? | ? | Novel |
40 | Ex 14 | 21985 | Missense | c.1540A>G | p.Arg514Gly | F | >35 | ? | Novel (2) |
41 | Ex 15 | 24230 | Insertion | c.1649_1650insCCTAAC | p.550_551insLeuThr | F | <35 | Pure | Novel |
42 | Ex 15 | 19591 | Missense | c.1664A>G | p.Asp555Gly | F | <35 | Pure | Novel |
43 | Ex 15 | 25941 | Missense | c.1670C>T | p.Ala557Val | F | <35 | Pure | Novel |
44 | Ex 15 | 21920 | Nonsense | c.1684C>T | p.Arg562Term | ? | ? | ? | 8 |
45 | Ex 15 | 21967 | Nonsense | c.1684C>T | p.Arg562Term | ? | >35 | Pure | 8 |
46 | Ex 15 | 21974 | Nonsense | c.1684C>T | p.Arg562Term | F | >35 | Pure | 8 |
47 | Ex 15 | 24201 | Nonsense | c.1684C>T | p.Arg562Term | F | <35 | Pure | 8 |
48 | Ex 15 | 25912 | Nonsense | c.1684C>T | p.Arg562Term | F | >35 | Pure | 8 |
49 | Ex 16 | 19594 | Nonsense | c.1702C>T | p.Gln568Term | ? | ? | ? | Novel |
50 | Ex 17 | 19597 | Missense | c.1821G>C | p.Trp607Cys | ? | ? | ? | 13 |
51 | Ex 17 | 25936 | Missense | c.1821G>C | p.Trp607Cys | F | <35 | Pure | 13 |
52 | Ex 1- Ex 3 | 24278 | Exon deletion | c.1-?_682+?del | Unknown | ? | ? | ? | 19 |
53 | Ex 2- Ex 9 | 21976 | Exon deletion | c.416-?_1493+?del | Unknown | F | <35 | Pure | Novel |
54 | Ex 8 | 21968 | Exon deletion | c.1099-?_1173+?del | Unknown | F | <10 | Pure | Novel |
55 | Ex 9–Ex 17 | 21940 | Exon deletion | c.1174-?_1851+?del | Unknown | F | >35 | Pure | Novel |
56 | Ex 2–Ex16 | 24270 | Exon deletion | c.416-?_1728+?del | Unknown | F | >35 | Pure | 40 |
57 | Ex 17 | 24281 | Exon deletion | c.1729-?_18511?del | Unknown | ? | ? | ? | 19 |