Table 1 Comparison of the results of CMA-COMP and Illumina array for AOH regions greater than 10 Mb in size and limited to single chromosomes
From: Combined array CGH plus SNP genome analyses in a single assay for optimized clinical testing
CMA-COMP array | Illumina SNP array | |||||
|---|---|---|---|---|---|---|
Chromosome | Genomic interval | Size in Mb | Genomic interval | Size in Mb | Location | UPD confirmed |
1 | 166 983 908–183 983 607 | 17.0 | 167 228 031–183 982 100 | 16.7 | Interstitial | — |
3 | 38 493 212–52 622 086 | 14.1 | 45 790 685–52 193 685 | 6.4 | Interstitial | — |
3 | 45 708 410–59 299 266 | 13.6 | 47 077 306–53 281 955a | 6.2 | Interstitial | — |
5 | 97 151 690–123 037 288 | 25.9 | 106 422 150–123 740 802 | 17.3 | Interstitial | — |
5 | 163 685 643–178 577 218 | 14.9 | 163 735 878–176 745 707 | 13.0 | Interstitial | — |
5 | 125 870 653–146 253 199 | 20.4 | 127 465 300–146 414 993 | 18.9 | Interstitial | — |
7 | 107 850 309–120 523 873 | 12.7 | 109 017 420–120 492 482 | 11.5 | Interstitial | — |
8 | 35 551 788–61 354 167 | 25.8 | 37 132 731–63 207 089 | 26.1 | Centromeric | — |
9 | 4 175 231–14 383 183 | 10.2 | 1 486 230–14 377 817 | 12.9 | Interstitial | UPD |
88 061 835–128 350 612 | 40.3 | 66 587 429–126 250 362 | 59.7 | Interstitial | — | |
12 | 1–22 919 015 | 22.9 | 1 607 841–22 154 162 | 20.5 | Terminal | — |
14 | 35 601 054–50 516 087 | 14.9 | 35 958 318–50 563 154 | 14.6 | Interstitial | No UPD |
14 | 33 803 584–70 306 504 | 36.5 | 33 742 889–70 200 059 | 36.4 | Interstitial | No UPD |
14 | 32 945 633–94 103 812 | 61.2 | 32 899 071–86 182 374 | 53.3 | Interstitial | — |
15 | 21 317 493–68 226 073 | 46.9 | 26 998 850–68 211 801 | 41.2 | Interstitial | UPD |
X | 95 140 723–119 474 584 | 24.3 | 95 721 890–119378541 | 23.6 | Interstitial | — |
