Table 1 Roles of EBV-encoded latent genes

From: Epstein–Barr virus latent genes

Latent genes

Roles

EBNA-1

Sequence-specific DNA-binding protein to EBV element; sequence-nonspecific chromosome association protein; transactivator of viral latent genes and host genes; responsible for episome replication, segregation and persistence of viral genome; involved in p53 degradation and oncogenesis

EBNA-LP

Transcriptional coactivator of EBNA-2-dependent viral and cellular gene transcription; primarily indirectly associates with host DNA sites located at or near the transcriptional start; associates with cellular transcriptional (co)factors and EBNA-2; dismisses repressor complex from promoter or enhancer sites; is essential for EBV-mediated B-cell transformation

EBNA-2

Together with EBNA-LP cooperatively activates viral and cellular gene transcription for transformation; primarily indirectly associates with host DNA sites located at the enhancer or intergenic region; associates with cellular transcriptional (co)factors and EBNA-LP; is critical for EBV-mediated B-cell transformation

EBNA-3A

A coactivator of EBNA-2, EBNA-3A and EBNA-3C associations with RBPJ inhibit RBPJ recruitments to DNA; downregulate cMyc transcription and block EBNA-2 activation effects; and induce CDKN2 and chemokines. Induces G1 arrests, which is essential for EBV-mediated B-cell transformation

EBNA-3B

A coactivator of EBNA-2; dispensable for B-cell transformation; viral tumor suppressor; and upregulates CXCL10. EBNA-3B-knockout induces DLBCL-like tumors

EBNA-3C

Coactivates with EBNA-2 host CXCR4 and CXCL12 genes; induces CDKN2, chemokines and aurora kinase B; mediates RB degradation; attenuates H2AX expression and overcomes EBV-infection-mediated DNA damage response; promotes cell proliferation; induces G1 arrests; essential for EBV-mediated B-cell transformation

LMP-1

Mimics the constitutively active form of CD40, a major EBV-encoded oncogene; activates NF-κB, JNK and p38 pathways; is critical for EBV-mediated B-cell transformation, a major EBV-encoded oncogene; activates NF-κB, JNK and p38 pathways; and induces EMT of NPC and acquisition of CSC-like properties

LMP-2A

Mimics constitutively active, antigen-independent BCR signaling through constitutive activation of the ERK/MAPK pathway224; blocks antigen-dependent BCR signaling; induces B-cell lymphoma in transgenic condition; is important but not essential for in vitro primary B-lymphocyte growth transformation; rescues the LMP-1-generated impairment in germinal center in the response to antigen in animals; confers resting B cells sensitive to NF-κB inhibition and apoptosis; suppresses differentiation and promotes epithelial cell spreading and motility in epithelial cells; and enriches cancer stem cell-like population

EBER

Most abundant EBV-encoded noncoding RNAs; augments colony formation and induces growth; confers cells resistance to PKR-dependent apoptosis; induces cytokines and modulates innate immune response; binds to La, PKR, L22, PRR and RIG-I; and EBER-mediated RIG-I activation likely contributes to EBV oncogenesis. EBER blockades of PKR-mediated phosphorylation of eIF2α results in blockage of eIF2α-mediated inhibition of protein synthesis and resistance to IFNα-induced apoptosis

miRNAs

Transcribed from BART and BHRF1; validated targets include Bim, BRUCE, CXCL11, DICER1, PUMA; has a role in sustaining latently infected cells. BHRF1 miRNA and BART miRNAs interfere with apoptosis. The miR-BART15-3p promoted apoptosis 331

  1. Abbreviations: BART, BamHI-A region rightward transcript; BHRF1, BamHI fragment H rightward open reading frame 1; CSC, cancer stem cell; DLBCL, diffuse large B-cell lymphoma; EBER, EBV-encoded nuclear antigen; EBV, Epstein–Barr virus; eIF2α, eukaryotic initiation factor 2α; EMT, epithelial–mesenchymal transition; ERK, extracellular signal-regulated kinase; IFN, interferon; JNK, c-Jun N-terminal kinase; LMP, latent membrane protein; MAPK, mitogen-activated protein kinase; NF-κB, nuclear factor-κB; NPC, nasopharyngeal carcinoma; LP, leader protein; PKR, RNA-dependent protein kinase; PRR, pattern-recognition receptors; RBPJ, recombination signal-binding immunoglobulin κJ region; RIG-1, retinoic acid-inducible gene I.