Table 1 Ten most abundant sequences in T-T and T-E TCRmini groups

From: Analyses of the TCR repertoire of MHC class II-restricted innate CD4+ T cells

T-T CD4 SP Thymocytes

T-E CD4 SP Thymocytes

CDR3α Seq.

T-T TCR mini

T-T TCR mini Op

CDR3α Seq.

T-E TCR mini

T-E TCR mini Op

CAARNSNNRIFF

24

24

CAARRNSNNRIFF

27

13

CAARGNNRIFF

19

5

CAARNSNNRIFF

25

13

CAARRNSNNRIFF

15

26

CAANSNNRIFF

17

8

CAANSNNRIFF

14

18

CAARSNNRIFF

17

2

CAARGSNNRIFF

12

10

CAARGSNNRIFF

14

6

CAARGNSNNRIFF

11

3

CAARPSNNRIFF

11

8

CAARRSNNRIFF

11

10

CAARRSNNRIFF

11

5

CAARPSNNRIFF

10

10

CAARGNRIFF

10

0

CAARSNNRIFF

9

10

CAASRNSNNRIFF

10

3

CAASSNNRIFF

9

7

CAASSNNRIFF

9

3

% of all sequences

35.54%

33.06%

% of all sequences

32.33%

22.93%

No. of total sequences

376

372

No. of total sequences

467

266

  1. Abbreviations: SP, single positive; TCR, T cell receptor; T–T, thymocyte–thymocyte.
  2. The shadowed sequences in gray color represent shared TCR CDR3α sequences.
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