Table 4 Genotype frequencies of IL28B SNPs in normal controls and patients with chronic HCV infection, SVR positive, SVR negative
Clinical | SVR positive | SVR negative | HCV | Normal | ||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
characteristic/ IL28B SNPs | Male (N=360) | Female (N=199) | Total (N=559) | Male (N=83) | Female (N=86) | Total (N=169) | Male (N=443) | Female (N=285) | Total (N=728) | Male (N)a | Female | Total |
rs12980275 | ||||||||||||
AA | 0.903 | 0.950 | 0.920 | 0.807 | 0.791 | 0.799 | 0.885 | 0.902 | 0.892 | 0.870 | 0.883 | 0.876 |
AG | 0.097 | 0.045 | 0.079 | 0.193 | 0.209 | 0.201 | 0.115 | 0.095 | 0.107 | 0.127 | 0.112 | 0.120 |
GG | 0.000 | 0.005 | 0.002 | 0.000 | 0.000 | 0.000 | 0.000 | 0.004 | 0.001 | 0.004 | 0.005 | 0.004 |
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CC | 0.000 | 0.000 | 0.000 | 0.012 | 0.000 | 0.006 | 0.002 | 0.000 | 0.001 | 0.004 | 0.002 | 0.003 |
CT | 0.094 | 0.045 | 0.077 | 0.205 | 0.186 | 0.195 | 0.115 | 0.088 | 0.104 | 0.101 | 0.105 | 0.103 |
TT | 0.906 | 0.955 | 0.923 | 0.783 | 0.814 | 0.799 | 0.883 | 0.912 | 0.894 | 0.895 | 0.892 | 0.894 |
rs11881222 | ||||||||||||
AA | 0.911 | 0.960 | 0.928 | 0.795 | 0.791 | 0.793 | 0.889 | 0.909 | 0.897 | 0.881 | 0.892 | 0.886 |
AG | 0.089 | 0.040 | 0.072 | 0.193 | 0.209 | 0.201 | 0.108 | 0.091 | 0.102 | 0.115 | 0.106 | 0.111 |
GG | 0.000 | 0.000 | 0.000 | 0.012 | 0.000 | 0.006 | 0.002 | 0.000 | 0.001 | 0.004 | 0.002 | 0.003 |
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CC | 0.000 | 0.000 | 0.000 | 0.012 | 0.000 | 0.006 | 0.002 | 0.000 | 0.001 | 0.006 | 0.002 | 0.004 |
CT | 1.000 | 1.000 | 1.000 | 0.988 | 1.000 | 0.994 | 0.998 | 1.000 | 0.999 | 0.994 | 0.998 | 0.996 |
TT | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 |
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CC | 1.000 | 1.000 | 1.000 | 0.998 | 1.000 | 0.994 | 0.998 | 1.000 | 0.999 | 0.914 | 0.998 | 0.953 |
CG | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.082 | 0.000 | 0.044 |
GG | 0.000 | 0.000 | 0.000 | 0.012 | 0.000 | 0.006 | 0.002 | 0.000 | 0.001 | 0.004 | 0.002 | 0.003 |
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CC | 0.917 | 0.960 | 0.932 | 0.807 | 0.791 | 0.799 | 0.896 | 0.909 | 0.901 | 0.88 | 0.881 | 0.883 |
CT | 0.083 | 0.040 | 0.068 | 0.193 | 0.209 | 0.201 | 0.104 | 0.091 | 0.099 | 0.115 | 0.119 | 0.117 |
TT | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 |
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CC | 0.917 | 0.960 | 0.932 | 0.795 | 0.779 | 0.787 | 0.894 | 0.905 | 0.898 | 0.885 | 0.892 | 0.888 |
CT | 0.083 | 0.040 | 0.068 | 0.193 | 0.221 | 0.207 | 0.104 | 0.095 | 0.100 | 0.109 | 0.105 | 0.107 |
TT | 0.000 | 0.000 | 0.000 | 0.012 | 0.000 | 0.006 | 0.002 | 0.000 | 0.001 | 0.006 | 0.002 | 0.004 |
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GG | 0.000 | 0.000 | 0.000 | 0.012 | 0.000 | 0.006 | 0.002 | 0.000 | 0.001 | 0.043 | 0.002 | 0.024 |
GT | 0.092 | 0.045 | 0.075 | 0.217 | 0.174 | 0.195 | 0.115 | 0.084 | 0.103 | 0.060 | 0.103 | 0.080 |
TT | 0.908 | 0.955 | 0.925 | 0.771 | 0.826 | 0.799 | 0.883 | 0.916 | 0.896 | 0.897 | 0.895 | 0.896 |
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AA | 0.000 | 0.000 | 0.000 | 0.012 | 0.000 | 0.006 | 0.002 | 0.000 | 0.001 | 0.004 | 0.002 | 0.003 |
AG | 0.092 | 0.035 | 0.072 | 0.169 | 0.221 | 0.195 | 0.106 | 0.091 | 0.100 | 0.098 | 0.097 | 0.097 |
GG | 0.908 | 0.965 | 0.928 | 0.819 | 0.779 | 0.799 | 0.892 | 0.909 | 0.898 | 0.899 | 0.901 | 0.900 |
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CC | 0.653 | 0.714 | 0.674 | 0.554 | 0.547 | 0.550 | 0.634 | 0.663 | 0.646 | 0.678 | 0.676 | 0.678 |
CG | 0.319 | 0.261 | 0.299 | 0.349 | 0.430 | 0.391 | 0.325 | 0.312 | 0.320 | 0.281 | 0.294 | 0.287 |
GG | 0.028 | 0.025 | 0.027 | 0.096 | 0.023 | 0.059 | 0.041 | 0.025 | 0.034 | 0.041 | 0.029 | 0.036 |