Table 1 Clinical features, EEG findings, brain MRI features of patients enrolled into the study and their WES results summarized

From: Prospective cohort study for identification of underlying genetic causes in neonatal encephalopathy using whole-exome sequencing

Patient ID/sex/age of onset

Pregnancy/delivery/Apgar scores/clinical features at presentation

Initial EEG

Brain MRI/MRS (age)

Candidate variant, gene, inheritance pattern

NE_NS 001/M/ 2 days

Oligohydramnios/planned C-section/9 and 9/poor feeding, hypotonia, lip smacking, encephalopathy, hypoglycemia

Excessive background discontinuity, bilateral independent sharp transients

Global cortical and bilateral putamen diffusion restriction, diffuse WM edema/prominent lactate peak (4 days)

Hemizygous, novel, c.632A>G (p.Asn211Ser) in CUL4B/X-linked, maternal

NE_NS 002/F/2 days

Unremarkable/vaginal forceps/3, 5, and 7/apnea, desaturations at delivery, right-sided seizures

Discontinuous background, multifocal sharp waves

Bilateral diffusion restriction in putamen, thalamus, hippocampi, corticospinal tracts, cerebral peduncles, dorsal pons/large lactate peak (4 days)

None

NE_NS 004/M/3 days (died 6 days)

Unremarkable/not known discharged 24 h/lethargy, fever, poor feeding, focal seizures, hypoglycemia

Discontinuous background, multiple multifocal subclinical seizures originating from bilateral temporo-occipital head region

Diffuse bilateral symmetrical diffusion restriction of the cerebral cortex and basal ganglia, diffuse WM edema, massive cerebral injury/lactate peak (5 days)

None

NE_NS 005/F/36 h

Unremarkable/C-section for fetal heart rate decelerations/9 and 9/apnea, cyanosis, GTS, lip smacking

Burst suppression, ictal EEG with generalized high-amplitude spike and sharp waves

Inferior basal ganglia hyperintensity in T1 weighted image/NP (6 days)

Heterozygous novel de novo c.634G>T (p.Asp212Tyr) in KCNQ2/AD

NE_NS 007/F/10 min

Unremarkable/vaginal delivery/7 and 7/hypotonia, apnea, GTS

Discontinuous background, bilateral negative rolandic sharp waves

Bilateral subdural, subarachnoid, and intraventricular hemorrhages and anterolateral temporal ischemic changes, diffuse WM edema/normal (2 days)

None

NE_NS 008/M/12 h

Unremarkable/vaginal vacuum/3 and 6/eye blinking, bicycling, GTS, apnea

Discontinuous background, intermittent sharp waves

Diffuse brain edema with effacement of ventricular lumen and pericerebral space/small lactate peak (1 day)

None

NE_NS 009/F/8 h

Unremarkable/vaginal vacuum/8 and 9/GTCS

Discontinuous background, frequent temporal sharp waves

Bilateral cortical T1 hyperintensity in posterior temporal and perisylvian gyri, T2 hyperintensity in thalami/normal (7 days)

Homozygous c.1894G>A (p.Gly632Ser) in AACS/AR/parents heterozygous

NE_NS 010/M/at birth

Gestational DM/vaginal/0, 0, and 8/poor tone and apnea at birth, mild hypoxic-ischemic encephalopathy, GTCS 6 days

Discontinuous background, bilateral temporal sharp waves

Bilateral increased signal in frontal and peritrigonal WM in T1/normal (8 days)

Heterozygous de novo, novel c.118G>A (p.Gly40Arg) in GNAO1/AD

NE_NS 011/F/6 h

Gestational DM/C-section for failure to progress/7 and 9/hypoglycemia (1 h) GTCS, apnea

Discontinuous background, burst suppression pattern, central midline sharp waves

Bilateral diffuse cortical and subcortical WM diffusion restriction most prominent in occipital lobes/normal (1 day)

None

NE_NS 015/F/6 days

Unremarkable/vaginal/6 and 8/apnea, focal tonic seizures

Discontinuous background, bilateral central temporal sharp waves

Bilateral frontoparietal subcortical WM T2 hyperintensity/normal (9 days)

Heterozygous, novel, de novo, c.4633A>G (p.Met1545Val) in SCN2A/AD

NE_NS 016/F/21 h

Oligohydramnios/vaginal/8 and 9/focal seizures

Discontinuous background, bilateral central and temporal rolandic sharp waves

Bilateral cortical subcortical, deep WM and basal ganglia diffusion restriction/normal (2 days)

None

NE_NS 017/F/24 h

Gestational DM/vaginal delivery/7 and 8/hypotonia, focal seizures and GTCS

Discontinuous background, bilateral central temporal sharp waves

Bilateral diffuse cortical, corpus callosum splenium, thalamus and posterior limb internal capsules diffusion restriction/normal (2 days)

Heterozygous, novel, de novo, c.1692G>A (p.Met564Ile) in RAI1/AD

NE_NS018/F/2 days

Unremarkable/vaginal delivery term/7 and 9/GTCS

Bilateral central temporal sharp waves

Symmetrical diffusion restriction in frontal, perirolandic, and occipital white matter, increased T2 signal in medial thalami/normal (3 days)

None

NE_NS019/F/1 day

Unremarkable/C-section/8 and 9/focal and GTCS

Multifocal frequent sharp waves, discontinuous background

Diffuse symmetrical white matter diffusion restriction (2 days), progressive diffusion restriction in white matter, brainstem, cerebellar white matter (9 days)/increased glycine peak

Compound heterozygous c.757G>C (p.Ala253Pro, maternal)/c.708T>G (p.His236Gln, paternal) in LIAS/AR

  1. AD, autosomal dominant; AR, autosomal recessive; CA, cortical atrophy; DB, discontinuous background; EEG, electroencephalography; F, female; GDD, global developmental delay; GER, gastroesophageal reflux; GERD, gastroesophageal reflux disease; GTS, generalized tonic seizures; GTCS, generalized tonic clonic seizures; He, hemizygous; Hmz, homozygous; Htz, heterozygous; M, male; HIE, hypoxic ischemic encephalopathy; Hmz, homozygous; Htz, heterozygous; MRI, magnetic resonance imaging; MRS, magnetic resonance spectroscopy; NA, not available; NC, no candidate gene; NP, not performed; ShW, sharp waves; WM, white matter.