Skip to main content

Thank you for visiting nature.com. You are using a browser version with limited support for CSS. To obtain the best experience, we recommend you use a more up to date browser (or turn off compatibility mode in Internet Explorer). In the meantime, to ensure continued support, we are displaying the site without styles and JavaScript.

Advertisement

Heredity
  • View all journals
  • Search
  • Log in
  • Content Explore content
  • About the journal
  • Publish with us
  • Sign up for alerts
  • RSS feed
  1. nature
  2. heredity
  3. original article
  4. article
Genomic in situ hybridization (GISH) and RFLP analysis for the identification of alien chromosomes in the backcross progeny of potato (+) tomato fusion hybrids
Download PDF
Download PDF
  • Original Article
  • Published: 01 March 1995

Genomic in situ hybridization (GISH) and RFLP analysis for the identification of alien chromosomes in the backcross progeny of potato (+) tomato fusion hybrids

  • E Jacobsen1,
  • J H de Jong2,
  • S A Kamstra2,
  • P M M M van den Berg1 &
  • …
  • M S Ramanna1 

Heredity volume 74, pages 250–257 (1995)Cite this article

  • 3570 Accesses

  • 65 Citations

  • Metrics details

Abstract

Backcross progenies, BC1 and BC2, derived from crossing a hexaploid potato (+) tomato fusion hybrid to tetraploid potato, were monitored for the presence of alien tomato chromosomes. For discriminating the tomato chromosomes from those of potato, both mitotic and meiotic chromosome preparations were labelled differentially through total genomic DNA in situ hybridization (GISH). The presence or absence of individual tomato chromosomes in the BC progeny was identified through RFLP analyses using chromosome-specific DNA probes. The results indicated that the BC1 plant possessed only nine chromosomes of tomato instead of the expected haploid set of 12. Of the nine persistent tomato chromosomes, there were three pairs that formed bivalents and three singles that formed univalents at meiosis. One of the single chromosomes was strikingly longer as a result of some structural mutation and could easily be identified in the hexaploid parent, the BC1 and in some of the BC2 plants. From the analyses of BC2 progeny there were indications of the presence in the BC1 of tomato chromosomes 1, 3 and 6 in duplicate, and chromosomes 8, 9 and 10 in the haploid condition. The number of tomato chromosomes transmitted to BC2 plants varied from one to six. The results of GISH revealed that a few BC2 plants possessed more tomato chromosomes than those deduced from RFLP analysis. This indicated the presence of some tomato chromosomes in duplicate and others in the haploid condition. The potential value of these genotypes for establishing potato lines with additions and substitutions of tomato chromosomes is discussed.

Similar content being viewed by others

Comparative transmission genetics of introgressed chromatin in reciprocal advanced backcross populations in Gossypium (cotton) polyploids

Article 08 February 2023

Analysis of genetic diversity and population structure among cultivated potato clones from Korea and global breeding programs

Article Open access 21 June 2022

Chromosome-scale and haplotype-resolved genome assembly of a tetraploid potato cultivar

Article Open access 03 March 2022

Article PDF

References

  • Anamthawat-Jónsson, K, Schwarzacher, T, Leitch, A R, Bennett, M D, and Heslop-Harrisson, J S. 1990. Discrimination between closely related Triticaea species using genomic DNA as a probe. Theor Appl Genet, 79, 721–728.

    Article  Google Scholar 

  • Bernatsky, R, and Tanksley, S D. 1986. Toward a saturated linkage map in tomato based on isozyme and random cDNA sequences. Genetics, 112, 887–898.

    Google Scholar 

  • Van Eck, H J, Jacobs, J M E, Van Dijk, J, Stiekema, W J, and Jacobsen, E. 1993. Identification and mapping of three flower colour loci of potato (S. tuberosum L.) by RFLP analysis. Theor Appl Genet, 86, 295–300.

    Article  CAS  Google Scholar 

  • Jocobsen, E, Hovenkamp-Hermelink, J H M, Krijgsheld, H T, Nijdam, H, Pijnacker, L P, Withold, B, and Feenstra, W J. 1989. Phenotypic and genotypic characterisation of an amylose-free starch mutant of potato. Euphytica, 44, 43–48.

    Article  Google Scholar 

  • Jacobsen, E, Reinhout, P, Bergervoet, J E M, De Looff, J, Abidin, P E, Huigen, D J, and Ramanna, M S. 1992. Isolation and characterization of potato-tomato somatic hybrids using an amylose-free potato mutant as parental genotype. Theor Appl Genet, 85, 159–164.

    Article  CAS  Google Scholar 

  • Jacobsen, E, Daniel, M K, Bergervoet-Van Deelen, J E M, Huigen, D J, and Ramanna, M S. 1994. The first and second backcross progeny of the intergeneric fusion hybrids of potato and tomato after crossing with potato. Theor Appl Genet, in press.

  • De Jong, J H, Wolters, A M A, Kok, J M, Verhaar, H, and Van Eden, J. 1993. Chromosome pairing and potential for intergeneric recombination in some hypotetraploid somatic hybrids of Lycopersicon esculentum (+) Solanum tuberosum Genome, 36, 1032–1041.

    Article  Google Scholar 

  • Kenton, A, Parokonny, A S, Gleba, Y Y, and Bennett, M D. 1993. Characterization of the Nicotiana tabacum L. genome by molecular cytogenetics. Mol Gen Genet, 240, 159–169.

    Article  CAS  Google Scholar 

  • King, I P, Purdie, K A, Orford, S E, Reader, S M, and Miller, T E. 1993. Detection of homoeologous chiasma formation in Triticum durum × Thinopyrum bessarabicum hybrids using genomic in situ hybridization. Heredity, 71, 369–372.

    Article  Google Scholar 

  • King, I P, Reader, S M, Purdie, K A, Orford, S E, and Miller, T E. 1994. A study of the effect of a homoeologous pairing promoter on chromosome pairing in wheat/rye hybrids using genomic in situ hybridization. Heredity, 72, 318–321.

    Article  CAS  Google Scholar 

  • Kreike, C M, Koning, J R A, and De Krens, F A. 1990. Non-radio-active detection of single-copy DNA-DNA hybrids. Plant Mol Biol Rep, 8, 172–179.

    Article  CAS  Google Scholar 

  • Leitch, I J, and Heslop-Harrisson, J S. 1994. Detection of digoxigenin labelled DNA probes hybridized to plant chromosomes in situ. In: Isaac, P. G. (ed.) Methods in Molecular Biology vol 28: Protocols for Nucleic Acid Analysis by Non-radioactive Probes pp. 18–25. Humana Press Inc., Totowa, NJ.

    Google Scholar 

  • Melchers, G, Sacristan, M D, and Holder, A A. 1978. Somatic hybrid plants of potato and tomato regenerated from fused protoplasts. Carlsberg Res Comm, 43, 203–218.

    Article  Google Scholar 

  • Mukai, Y, Nakahara, Y, and Yamamoto, M. 1993. Simultaneous discrimination of the three genomes in hexaploid wheat by multicolor fluorescence in situ hybridization using total genomic and highly repeated DNA probes. Genome, 36, 489–494.

    Article  CAS  Google Scholar 

  • Pijnacker, L P, and Ferwerda, M A. 1984. Giemsa C-banding of potato chromosomes. Can J Genet Cytol, 26, 415–419.

    Article  Google Scholar 

  • Ramanna, M S, and Wagenvoort, M. 1976. Identification of the trisomie series in diploid Solanum tuberosum L., Group Tuberosum. I. Chromosome identification. Euphytica, 25, 233–240.

    Article  Google Scholar 

  • Schoenmakers, H C H, Koornneef, M, Alefs, S J H M, Gerrits, W F M, Van Der Kop, D, Chérel, I, and Caboche, M. 1991. Isolation and characterization of nitrate reductase-deficient mutants in tomato (Lycopersicon esculentum Mill). Mol Gen Genet, 227, 458–464.

    Article  CAS  Google Scholar 

  • Schoenmakers, H C H, Wolters, A M A, Nobel, E M, De Klein, C M J, and Koornneef, M. 1994. Allotriploid somatic hybrids of diploid tomato (Lycopersicon esculentum Mill) and monoploid potato (Solanum tuberosum L.). Theor Appl Genet, 87, 328–336.

    Article  Google Scholar 

  • Schwarzacher, T, Anamthawat-Jónsson, K, Harrison, G E, Islam, A K M R, Jia, J Z, King, I P, Leitch, A R, Miller, T E, Reader, S M, Rogers, W J, Shi, M, and Heslop-Harrisson, J S. 1992. Genomic in situ hybridization to identify alien chromosomes and chromosome segments in wheat. Theor Appl Genet, 84, 778–786.

    Article  CAS  Google Scholar 

  • Schwarzacher, T, and Heslop-Harrisson, J S. 1994. Direct fluorochrome labelled DNA probes for direct fluorescent in situ hybridization to chromosomes. In: Isaac, P. G. (ed.) Methods in Molecular Biology vol 28: Protocols for Nucleic Acid Analysis by Non-radioactive Probes pp. 8–17. Humana Press Inc., Totowa, NJ.

    Google Scholar 

  • Schwarzacher, T, and Leitch, A R. 1994. Enzymatic treatment of plant material to spread chromosomes for in situ hybridization. In: Isaac, P. G. (ed.) Methods in Molecular Biology vol 28: Protocols for Nucleic Acid Analysis by Non-radioactive Probes pp. 2–7. Humana Press Inc., Totowa, NJ.

    Google Scholar 

  • Shepard, J F, Bidney, D, Barsby, T, and Kemble, R. 1983. Genetic transfer in plants through interspecific protoplast fusion. Science, 219, 683–688.

    Article  CAS  Google Scholar 

  • Tanksley, S D, Ganal, M W, Prince, J P, De Vincente, M C, Bonierbale, M W, Broun, P, Fulton, T M, Giovannoni, J J, Grandillo, S, Martin, G B, Messeguer, R, Miller, J C, Miller, L, Paterson, A H, Pineda, O, Röder, M S, Wing, R A, Wu, W, and Young, N D. 1992. High density molecular genetic maps of the tomato and potato genomes. Genetics, 132, 1141–1160.

    CAS  PubMed  PubMed Central  Google Scholar 

  • Wolters, A M A, Schoenmakers, H C H, Van Der Meulen-Muisers, J J M, Van Der Knapp, E, Derks, F H M, Koornneef, M, and Zelcer, A. 1991. Limited DNA elimination from the irradiated potato parent in fusion products of albino Lycopersicon esculentutn and Solanum tuberosum. Theor Appl Genet, 83, 225–232.

    Article  CAS  Google Scholar 

  • Wolters, A M A, Schoenmakers, H C H, Kamstra, S, Van Eden, J, De Jong, J H, and Koornneef, M. 1994. Mitotic and meiotic irregularities in somatic hybrids of Lycopersicon esculentum and Solanum tuberosum. Genome, in press.

  • Yeh, B P, and Peloquin, S J. 1965. Pachytene chromosomes of the potato (Solanum tuberosum Group Andigena). Am J Bot, 52, 1014–1020.

    Article  Google Scholar 

Download references

Author information

Authors and Affiliations

  1. Department of Plant Breeding, The Graduate School of Experimental Plant Sciences, Wageningen Agricultural University, The Netherlands

    E Jacobsen, P M M M van den Berg & M S Ramanna

  2. Department of Genetics, The Graduate School of Experimental Plant Sciences, Wageningen Agricultural University, The Netherlands

    J H de Jong & S A Kamstra

Authors
  1. E Jacobsen
    View author publications

    Search author on:PubMed Google Scholar

  2. J H de Jong
    View author publications

    Search author on:PubMed Google Scholar

  3. S A Kamstra
    View author publications

    Search author on:PubMed Google Scholar

  4. P M M M van den Berg
    View author publications

    Search author on:PubMed Google Scholar

  5. M S Ramanna
    View author publications

    Search author on:PubMed Google Scholar

Rights and permissions

Reprints and permissions

About this article

Cite this article

Jacobsen, E., de Jong, J., Kamstra, S. et al. Genomic in situ hybridization (GISH) and RFLP analysis for the identification of alien chromosomes in the backcross progeny of potato (+) tomato fusion hybrids. Heredity 74, 250–257 (1995). https://doi.org/10.1038/hdy.1995.38

Download citation

  • Received: 05 May 1994

  • Issue date: 01 March 1995

  • DOI: https://doi.org/10.1038/hdy.1995.38

Share this article

Anyone you share the following link with will be able to read this content:

Sorry, a shareable link is not currently available for this article.

Provided by the Springer Nature SharedIt content-sharing initiative

Keywords

  • alien chromosome addition
  • backcross progeny
  • GISH
  • Lycopersicon esculentum
  • Solanum tuberosum
  • somatic hybrids

This article is cited by

  • Chromosome behavior during meiosis in pollen mother cells from Saccharum officinarum × Erianthus arundinaceus F1 hybrids

    • Xueting Li
    • Fei Huang
    • Zuhu Deng

    BMC Plant Biology (2021)

  • Pairing analysis and in situ Hybridisation reveal autopolyploid-like behaviour in Solanum commersonii × S. tuberosum (potato) interspecific hybrids

    • Paola Gaiero
    • Cristina Mazzella
    • Hans de Jong

    Euphytica (2017)

  • Meiotic analysis and FISH with rDNA and rice BAC probes of the Thai KPS 01-01-25 sugarcane cultivar

    • Sarut Thumjamras
    • Siriluck Iamtham
    • Hans de Jong

    Plant Systematics and Evolution (2016)

  • Molecular evolution of 35S rDNA and taxonomic status of Lycopersicon within Solanum sect. Petota

    • Nataliya Y. Komarova
    • Guido W. Grimm
    • Roman A. Volkov

    Plant Systematics and Evolution (2008)

  • Genotyping of somatic hybrids between Festuca arundinacea Schreb. and Triticum aestivum L.

    • Yunfei Cai
    • Fengning Xiang
    • Guangmin Xia

    Plant Cell Reports (2007)

Download PDF

Advertisement

Explore content

  • Research articles
  • Reviews & Analysis
  • News & Comment
  • Podcasts
  • Current issue
  • Collections
  • Follow us on Twitter
  • Sign up for alerts
  • RSS feed

About the journal

  • Journal Information
  • Open access publishing
  • About the Editors
  • Contact
  • About the Partner
  • For Advertisers
  • Subscribe

Publish with us

  • For Authors & Referees
  • Language editing services
  • Open access funding
  • Submit manuscript

Search

Advanced search

Quick links

  • Explore articles by subject
  • Find a job
  • Guide to authors
  • Editorial policies

Heredity (Heredity)

ISSN 1365-2540 (online)

ISSN 0018-067X (print)

nature.com sitemap

About Nature Portfolio

  • About us
  • Press releases
  • Press office
  • Contact us

Discover content

  • Journals A-Z
  • Articles by subject
  • protocols.io
  • Nature Index

Publishing policies

  • Nature portfolio policies
  • Open access

Author & Researcher services

  • Reprints & permissions
  • Research data
  • Language editing
  • Scientific editing
  • Nature Masterclasses
  • Research Solutions

Libraries & institutions

  • Librarian service & tools
  • Librarian portal
  • Open research
  • Recommend to library

Advertising & partnerships

  • Advertising
  • Partnerships & Services
  • Media kits
  • Branded content

Professional development

  • Nature Awards
  • Nature Careers
  • Nature Conferences

Regional websites

  • Nature Africa
  • Nature China
  • Nature India
  • Nature Japan
  • Nature Middle East
  • Privacy Policy
  • Use of cookies
  • Legal notice
  • Accessibility statement
  • Terms & Conditions
  • Your US state privacy rights
Springer Nature

© 2025 Springer Nature Limited