Table 2 Differentially expressed genes based on the microarray analysis (see Figure) between triploid and diploid Vibrio challenged salmon are shown. Putative functions have been assigned to each gene

From: Transcriptional differences between triploid and diploid Chinook salmon (Oncorhynchus tshawytscha) during live Vibrio anguillarum challenge

Accession number

Gene name/suspected

Gene ontology

3N fold change (+/−)

BG933901

MHC-I 3′ UTR

Immune response

+1.626

AF184937

Low molecular mass protein 7

Immune response

+2.090

AF180488

β-2 microglobulin

Cellular defense response

+2.195

NP004244

Phospholipase A2-activating protein

Inflammatory response

−1.449

NP000234

Mediterranean fever protein; pyrin

Inflammatory response

−1.587

BG934453

Glutathione peroxidase

Response to oxidative stress

+1.718

NP033292

Selenophosphate synthetase 2

Selenocysteine biosynthesis

−1.659

NP008454

NADH dehydrogenase subunit 4

Electron transport

+1.841

XP010362

Solute carrier family 25 (adenine nucleotide translocator)

Generation of precursor metabolites and energy

+1.559

XP001466

Tyrosine phosphatase, receptor type, f polypeptide

Cell matrix adhesion

+1.626

NP081864

Autoimmune infertility-related protein

DNA metabolism

−1.508

BG934633

Atlantic salmon cDNA clone

Unknown

+2.119

  1. Abbreviation: MHC, major histocompatibility complex.
  2. Triploid up regulation in comparison to diploid is denoted by positive values and a down regulation is denoted by negative values. Gene ontology listed was obtained from http://www.geneontology.org.
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