Table 3 Genetic diversity in populations of Vriesea gigantea

From: Range-wide patterns of nuclear and chloroplast DNA diversity in Vriesea gigantea (Bromeliaceae), a neotropical forest species

ID

Nuclear microsatellie

cpDNA

 

Latitude S

P

Apr

Rs

Var

HO

HE

F IS

Haplotypes

HE (s.e.)

Allelic richness

SLES

20°07′

70

11

1.82

18.523

0.251

0.318

0.244

1;2

0.118 (0.101)

0.412

RIRJ

22°57′

100

4

3.49

50.575

0.539

0.699

0.249***

4;5;11

0.676 (0.160)

2.000

PTRJ

23°12′

100

7

3.38

82.709

0.614

0.727

0.157***

13

0.000 (0.000)

0.000

BESP

23°50′

100

4

3.49

54.807

0.518

0.715

0.278***

3;6;9;10;12

0.676 (0.105)

2.349

JASP

24°40′

100

10

3.49

35.486

0.496

0.718

0.313***

8;9;10;11;12

0.772 (0.070)

2.810

PAPR

25°30′

100

1

3.08

32.273

0.448

0.647

0.312***

8;12

0.458 (0.095)

0.971

MBSC

26°48′

100

0

3.15

29.918

0.466

0.676

0.313***

8;10;12

0.473 (0.136)

1.404

FLSC

27°26′

100

0

2.75

30.473

0.549

0.580

0.053

8;12

0.692 (0.075)

1.909

VBSC

27°40′

100

1

3.08

18.236

0.508

0.669

0.245***

8;10;12

0.440 (0.112)

0.965

GASC

28°04′

100

1

2.86

29.721

0.455

0.614

0.263***

7;8;12

0.600 (0.069)

1.464

MARS

29°48′

100

1

2.57

14.803

0.440

0.566

0.225***

8;9;12

0.600 (0.109)

1.754

ITRS

30°25′

100

0

2.43

15.387

0.274

0.533

0.489***

8;9;12

0.676 (0.070)

1.857

TMRS

31°56′

40

0

1.18

1.199

0.039

0.065

0.408***

9;12

0.133 (0.112)

0.467

  1. Abbreviations: Apr, number of private alleles; FIS, inbreeding coefficient for nuclear microsatellite; HE, expected heterozygosity; HO, observed heterozygosity; P, percentage of polymorphic loci; Rs, allelic richness; Var, variance in allele size.
  2. Departures of within-population inbreeding coefficients (FIS) from Hardy–Weinberg equilibrium (HWE) are indicated by asterisks, ***P<0.001.
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