Table 3 DNA polymorphism in non-recombining mating-type-specific (A1 and A2), and recombining genes for the entire sample of M. violaceum from S. latifolia plants

From: DNA polymorphism in recombining and non-recombing mating-type-specific loci of the smut fungus Microbotryum

 

Na

L b

S c

π (%)d

s.d. (π) e

TajD f

ZnS g

Rh

Rmini

A1

19

4652

23

0.11

0.071

−0.828

0.2738

0.0002

0

A2

19

3136

16

0.2

0.07

1.352

0.4168

0.0006

0

A1+A2

19

7791

39

0.15

0.071

0.088

0.24

0.0007

1

Recombining

38

5835

53

0.22

0.105

0.0228

0.1078

0.0066

9

  1. Abbreviations: M. violaceum, Microbotryum violaceum; S. latifolia, Silene latifolia.
  2. a Sample size.
  3. b Number of positions analysed (after excluding indels).
  4. c Number of polymorphic sites.
  5. d Average heterozygosity (per 100 sites).
  6. e s.d. of average heterozygosity (per 100 sites).
  7. f Tajima's D (Tajima, 1989).
  8. g Multilocus linkage disequilibrium statistic ZnS (Kelly, 1997).
  9. h Per-nucleotide population recombination rate (Hudson, 1987).
  10. i Minimal number of recombination events (Hudson and Kaplan, 1985).
Back to article page