Table 3 SNP loci annotations and significance values for second-year Ht, carbon isotope discrimination (Δ13C) and foliar nitrogen level (%N)
SNP Locus | Trait | Annotation | P value | Q value | E-value |
|---|---|---|---|---|---|
0_14415_01_190NC | Ht | Unknown | 2.38E-05 | 8.87E-02 | — |
0_17030_01_94NC | Δ13C | Unknown | 4.95E-07 | 1.91E-05 | — |
0_8304_02_414NS | Δ13C | Mitochondrial protein | 2.84E-05 | 4.04E-02 | 5E-66 |
0_17543_01_196SYN | Δ13C | Unknown | 3.98E-05 | 2.97E-03 | — |
0_10921_01_353NC | Δ13C | Unknown | 8.67E-05 | 7.88E-03 | — |
2_1501_01_109NC | Δ13C | Unknown | 1.43E-05 | 1.97E-02 | — |
CL599Contig1_07_109SYN | Δ13C | Putative heme-activated protein | 3.79E-04 | 2.24E-02 | 1E-53 |
0_3648_01_357NS | Δ13C | AP2 domain transcription factor | 6.26E-04 | 3.63E-02 | 1E-20 |
UMN_6338_01_99NS | %N | Predicted protein | 2.05E-07 | 2.11E-04 | 7E-58 |
2_7865_01_156NC | %N | Receptor protein kinase-like protein | 3.53E-07 | 2.11E-04 | 9E-29 |
2_1087_01_86NC | %N | Hypothetical protein | 1.98E-06 | 1.08E-03 | 5E-37 |
CL1074Contig1_03_101NC | %N | Predicted protein | 6.17E-06 | 2.77E-03 | 5E-54 |
0_17195_01_417NC | %N | Glutamate decarboxylase | 1.89E-05 | 4.58E-03 | 3E-47 |
2_4191_01_104NC | %N | Unknown | 1.55E-04 | 2.71E-02 | — |
