Table 2 Values of FIS (Weir and Cockerham 1984) for samples from the DPH case study and the significance of deviation of genotype frequencies from Hardy–Weinberg equilibrium (P)

From: Contrasting responses to selection in class I and class IIα major histocompatibility-linked markers in salmon

 

DPH

OWW (N=55)

CAW (N=48)

 

1993 0+ (N=45)

1993 1+ (N=50)

2002 0+ (N=45)

2002 1+ (N=51)

  

Ssa D144b

 FIS

−0.007

+0.114

+0.121

+0.157

+0.031

+0.029

 P

0.2089

0.0055

0.1098

0.0190

>0.0001

0.0545

Ssa 171

 FIS

+0.013

−0.012

−0.147

+0.028

+0.028

+0.051

 P

0.0460

0.5265

0.9571

0.2574

0.0062

0.0357

Ssa 2215SP

 FIS

−0.009

+0.070

+0.113

+0.074

+0.281

−0.032

 P

0.8879

0.3332

0.0044

0.2369

0.0002

0.1871

SsoSL 85

 FIS

+0.025

+0.082

+0.004

−0.003

+0.063

+0.183

 P

0.1160

0.0158

0.5275

0.5162

0.0066

0.0037

Ssa 197

 FIS

+0.012

+0.036

−0.049

−0.002

+0.575

−0.028

 P

0.5630

0.2662

0.4270

0.6161

>0.0001

0.7733

Ssa 1G7SP

 FIS

+0.069

+0.013

+0.067

+0.172

+0.304

+0.032

 P

0.7914

0.0505

0.3465

>0.0001

0.0001

0.0592

Ssa 202

 FIS

+0.176

+0.365

−0.040

+0.012

+0.271

+0.210

 P

0.0013

>0.0001

0.5938

0.1613

0.0033

>0.0001

Ssa D170

 FIS

+0.279

+0.130

+0.059

+0.129

+0.240

+0.007

 P

>0.0001

0.0036

>0.0001

0.0011

>0.0001

>0.0001

Sasa-DAA-3UTR

 FIS

+0.132

+0.303

+0.104

−0.005

+0.118

−0.223

 P

0.0038

0.0029

0.0674

0.6681

0.6304

0.0013

Sasa-UBA-3UTR

 FIS

+0.113

+0.114

+0.115

+0.262

+0.313

+0.027

 P

0.3261

0.0055

0.1193

>0.0001

>0.0001

0.0390

  1. Abbreviations: FIS, inbreeding coefficient; 3-UTR, 3-untranslated region.
  2. River abbreviations: BRH, Burrishoole; CAW, Carrowinskey; DPH, Delphi; MOY, Moy; OWD, Owenduff; OWM, Owenmore; OWW, Owenwee.
  3. Values in bold are those that remained significant after Bonferroni correction for the number of tests in this series (α=0.05/60=0.0008).
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