Table 1 Sample descriptions including locations, coordinates, dates, spawning seasons, percentage of fish in spawning condition and sample sizes (n) of genetic markers used

Location	Sampling coordinates	Date	Spawning season	Spawning (%)	Fish (n)	Microsatellites (including Cpa112) (n)	MHC (n)	Allozymes (n)	mtDNA (n)	All markers in the same fish (n)
Flamborough	54.60N/00.59W	14-09-2002	Autumn	100	80	80^a^,^b	73	55	80	48
Flamborough	54.57N/00.45W	17-09-2003	Autumn	99	93	93^a^,^b^,^c^,^d	80	93^c	91	79
Berwick	56.30N/00.97E	20-08-2002	Autumn	98	90	90^a^,^b	83^e	85	85	73
Berwick	57.70N/01.45W	22-08-2003	Autumn	88	96	96^a^,^b^,^c	90	96^c	80	72
Tjøme	59.35N/10.55E	13-03-2002	Spring	98	95	95^b^,^f	95^e	95	84	84
Tjøme	59.35N/10.55E	04-03-2003	Spring	100	104	104^b^,^c^,^d^,^f	94	104^c	86	75
Kalix	65.80N/22.72E	12-06-2002	Spring	44	97	97^g	90	97^g	85	78
Kalix	65.80N/22.72E	19-06-2003	Spring	94	88	88^c^,^g	79	88^c^,^g	69	64
				Sum	743	743	684	713	660	573

Abbreviations: MHC, major histocompatibility complex; mtDNA, mitochondrial DNA.
Only fish that were successfully analyzed for at least three different genetic marker types were used in subsequent statistical analyses. Genotypes previously used by
^a Mariani et al. (2005)
^b Ruzzante et al. (2006)
^c Larsson et al. (2007)
^d Gaggiotti et al. (2009)
^e Stet et al. (2008)
^f Bekkevold et al. (2005)
^gLarsson et al. (2010).

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