Table 2 Species-level estimates of genetic diversity and genetic differentiation per locus

Species	Locus	A	A_e	pA_e	h_T	F_ST	F_IS
B. heracleifolia	B4329	4	1.981	0.021	0.303	0.460**	0.118^NS
	B3043	6	1.974	0.164	0.181	0.462*	0.689**
	B6278	2	1.149	0.033	0.036	0.676^NS	0.700^NS
	B5347	7	2.551	0.194	0.316	0.342**	0.324**
	B3348	9	3.157	0.169	0.498	0.312**	0.223**
	B7112	6	1.763	0.212	0.116	0.140^NS	0.320**
	B3820	10	3.349	0.199	0.484	0.350**	0.046^NS
	B134	8	2.752	0.163	0.396	0.269*	0.244*
	B332	5	1.789	0.108	0.150	0.492**	0.340*
	Across loci	6.3	2.274	0.140	0.276	0.364**	0.249**
B. nelumbiifolia	B4329	5	3.382	0.072	0.536	0.266*	0.060
	B3043	8	3.284	0.297	0.457	0.188**	0.373*
	B6278	5	2.904	0.219	0.472	0.144*	0.421**
	B5347	1	1.000	0	0	NA	NA
	B3348	4	2.955	0.096	0.488	0.125**	0.316**
	B7112	4	1.946	0.181	0.335	0.383*	0.372**
	B3820	4	2.400	0.001	0.302	0.554**	0.512*
	B134	6	2.138	0.075	0.323	0.142*	0.234**
	B332	5	3.108	0.188	0.428	0.315*	0.868**
	Across loci	4.7	2.569	0.125	0.371	0.277**	0.454**

Abbreviations: A, total number of alleles per locus; A_e, allelic richness rarefied to 11 individuals; pA_e, private allelic richness rarefied to 22 gene copies; h_T gene diversity; NS, not significant.
*P<0.05; **P<0.01.

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