Table 1 Biparental testcross population parameters, number of lines and number of polymorphic low-density and GBS SNPs within 19 maize biparental populations, and heritability of target trait–environment combinations (GY, AD and PH in WW and SS environments)

From: Genomic prediction in biparental tropical maize populations in water-stressed and well-watered environments using low-density and GBS SNPs

Pop. no.

Pedigree

Tester

Pop. type

Na

Nb

Nc

Heritability

       

GY_WW

GY_SS

AD_WW

AD_SS

PH_WW

PH_SS

1

P1 × P2

T1

F2

165

201

62 776

0.31

0.32

0.56

0.53

0.82

0.31

2

P2 × P3

T1

F2

162

188

56 891

0.22

0.18

0.54

0.40

0.69

0.69

3

P2 × P4

T1

F2

126

183

55 583

0.35

0.00

0.34

0.31

0.52

0.44

4

P2 × P5

T1

F2

163

209

65 223

0.27

0.00

0.56

0.44

0.39

0.22

5

P4 × P1

T1

F2

183

208

60 039

0.40

0.07

0.33

0.38

0.63

0.56

6

P6 × P7

T1

F2

173

195

48 662

0.37

0.00

0.71

0.73

0.76

0.21

7

P8 × P9

T1

F2

181

212

52 546

0.40

0.26

0.74

0.51

0.61

0.40

8

P8 × P7

T1

F2

184

212

55 039

0.55

0.10

0.77

0.59

0.80

0.34

9

P10 × P11

T1

F2

184

211

58 594

0.29

0.16

0.56

0.45

0.75

0.61

10

P12 × P13

T1

F2

174

194

55 301

0.31

0.11

0.53

0.52

0.74

0.06

11

P14 × P15

T2

BC1F2

184

170

54 208

0.11

0.01

0.60

0.50

0.81

0.37

12

P14 × P16

T2

BC1F2

184

165

53 761

0.28

0.05

0.64

0.39

0.71

0.26

13

P17 × P18

T2

BC1F2

184

185

70 728

0.45

0.35

0.64

0.34

0.75

0.52

14

P18 × P19

T2

BC1F2

160

162

52 468

0.44

0.27

0.68

0.56

0.62

0.39

15

P19 × P15

T2

BC1F2

178

176

49 126

0.00

0.38

0.61

0.41

0.66

0.02

16

P15 × P5

T1

BC1F2

184

183

67 178

0.31

0.00

0.65

0.57

0.78

0.52

17

P20 × P17

T2

F2

173

166

61 036

0.45

0.27

0.70

0.50

0.88

0.56

18

P21 × P22

T2

BC1F2

176

172

78 005

0.00

0.21

0.72

0.55

0.79

0.57

19

P22 × P23

T2

BC1F2

155

184

66 109

0.39

0.39

0.69

0.62

0.77

0.36

   

Avg

172

188

58 731

0.31

0.16

0.61

0.49

0.71

0.39

  1. Abbreviations: AD, anthesis day; GBS, genotyping-by-sequencing; GY, grain yield; PH, plant height; SNP, single-nucleotide polymorphism; SS, water-stressed; WW, well-watered.
  2. aNumber of lines in each biparental population.
  3. bNumber of polymorphic low-density SNPs in each biparental population.
  4. cNumber of polymorphic GBS high-density SNPs in each biparental population.