Table 1 Indexes of genetic diversity in different WB populations and in domestic pigs, calculated on the complete data set (50 K)

From: Genomic diversity and differentiation of a managed island wild boar population

Population

Sample size

N of polymorphic loci

HE

HO

MAF (±s.d.)

(a)

WB Sardinia

99

38 236

0.1903

0.1605

0.141 (±0.160)

WB Italy

15

28 600

0.1898

0.1757

0.141 (±0.163)

WB Europe

183

40 504

0.2367

0.1934

0.178 (±0.168)

Domestic Pigs

105

47 099

0.3872

0.2513

0.251 (±0.147)

(b)

WB Sardinia (Top)

15

24 014

0.1571

0.1406

0.117 (±0.157)

WB Sardinia (Bottom)

15

35 553

0.2098

0.1812

0.157 (±0.159)

WB Sardinia (Random)

15

28 403

0.1811

0.1604

0.134 (±0.160)

WB Italy

15

28 600

0.1898

0.1757

0.141 (±0.163)

WB Europe

15

32 345

0.2242

0.1877

0.169 (±0.168)

Domestic Pigs

15

45 297

0.3228

0.2544

0.243 (±0.150)

  1. Abbreviations: MAF, minor allele frequency; WB, wild boar. (a) Results for all the sampled individuals. (b) Results for a random subset of 15 individuals for each population. For the Sardinian population, values are referred to a random sample (Random) and to the upper (Top) and lower (Bottom) extremes of the q-value distribution (that is, the most pure and the most introgressed individuals).
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