Table 2 Taxonomic assignment and proposed function of OTUs with more than 0.5% difference in relative abundance between Algarrobo-1 and Viçosa-1
Phylum | Class | Order | Family | Genus | Species | GreenGenes OTU reference | GenBank accession number | Algarrobo-1 relative abundance | Viçosa-1 relative abundance | Proposed function |
|---|---|---|---|---|---|---|---|---|---|---|
Proteobacteria | Gammaproteobacteria | Pseudomonadales | Pseudomonadaceae | Pseudomonas | 646549 | AM936014.1 | 31.6% | 34.3% | Environmental sample form polluted industrial site | |
Proteobacteria | Gammaproteobacteria | Pseudomonadales | Moraxellaceae | Psychrobacter | maritimus | 324143 | EU000245.1 | 2.7% | 0.0% | Bacterium sampled in South Korea, present in sea ice |
Proteobacteria | Gammaproteobacteria | Enterobacteriales | Enterobacteriaceae | Citrobacter | 559204 | GU272271.1 | 13.1% | 10.6% | Extracted from phyllosphere of dichlorvos-treated rape plants, found almost everywhere in soil and water | |
Proteobacteria | Gammaproteobacteria | Enterobacteriales | Enterobacteriaceae | 797229 | HM186527.1 | 2.0% | 3.2% | Uncultured bacterium found at 9-52 meter below ground | ||
Proteobacteria | Gammaproteobacteria | Enterobacteriales | Enterobacteriaceae | Yersinia | ruckeri | 759061 | FN668384.1 | 3.6% | 4.7% | Fish pathogen of Atlantic salmon |
Bacteroidetes | Cytophagia | Cytophagales | Cytophagaceae | 637931 | HM845874.1 | 0.0% | 1.0% | Uncultured bacterium found in wounds of diabetic mice | ||
Proteobacteria | Betaproteobacteria | Neisseriales | Neisseriaceae | Neisseria | 4305062 | JQ453291.1 | 0.9% | 0.0% | Uncultured bacterium found in human mouth | |
Proteobacteria | Gammaproteobacteria | Enterobacteriales | Enterobacteriaceae | 813457 | HM461200.1 | 2.7% | 2.0% | Enterobacter, cultured soil bacterium from Colombia | ||
Proteobacteria | Alphaproteobacteria | Rhodobacterales | Rhodobacteraceae | Paracoccus | 590586 | GU061873.1 | 0.0% | 0.6% | Uncultured marine bacterium from South Chinese Sea | |
Proteobacteria | Betaproteobacteria | Burkholderiales | Oxalobacteraceae | Janthinobacterium | lividum | 832674 | HQ538673.1 | 0.6% | 0.0% | Soil bacterium isolated from Chinese sewer system |
Firmicutes | Bacilli | Lactobacillales | Streptococcaceae | Lactococcus | 716006 | EU560799.1 | 0.5% | 0.0% | Uncultured glucose fermenting bacterium found in intestinal tract of Apriona germari beetle larvae |
