Table 3 Taxonomic assignment and proposed function of OTUs with more than 100 reads difference in absolute read abundance between Algarrobo-1 and Viçosa-1
Phylum | Class | Order | Family | Genus | Species | GreenGenes OTU reference | GenBank accession number | Algarrobo-1 number of reads | Viçosa-1 number of reads | Proposed function |
|---|---|---|---|---|---|---|---|---|---|---|
Proteobacteria | Gammaproteobacteria | Pseudomonadales | Moraxellaceae | Psychrobacter | maritimus | 324143 | EU000245.1 | 1300 | 0 | Bacterium sampled in South Korea, present in sea ice |
Bacteroidetes | Cytophagia | Cytophagales | Cytophagaceae | 637931 | HM845874.1 | 0 | 468 | Uncultured bacterium found in wounds of diabetic mice | ||
Proteobacteria | Betaproteobacteria | Neisseriales | Neisseriaceae | Neisseria | 4305062 | JQ453291.1 | 427 | 0 | Uncultured bacterium found in human mouth | |
Proteobacteria | Betaproteobacteria | Burkholderiales | Oxalobacteraceae | Janthinobacterium | lividum | 832674 | HQ538673.1 | 276 | 0 | Soil bacterium isolated from Chinese sewer system |
Proteobacteria | Alphaproteobacteria | Rhodobacterales | Rhodobacteraceae | Paracoccus | 590586 | GU061873.1 | 0 | 269 | Uncultured marine bacterium from South Chinese Sea | |
Firmicutes | Bacilli | Lactobacillales | Streptococcaceae | Lactococcus | 716006 | EU560799.1 | 265 | 0 | Uncultured glucose fermenting bacterium found in intestinal tract of Apriona germari beetle larvae | |
Proteobacteria | Betaproteobacteria | Burkholderiales | Comamonadaceae | Rhodoferax | 719367 | HQ008584.1 | 201 | 0 | Phototrophic bacterium sampled in freshwater in Argentina | |
Actinobacteria | Actinobacteria | Actinomycetales | Micrococcaceae | Kocuria | palustris | 1002005 | JF064759.1 | 185 | 0 | Aerobic actinobacterium found on Typha angustifolia leaves on the Danube river |
Bacteroidetes | Flavobacteriia | Flavobacteriales | Weeksellaceae | Chryseobacterium | 656229 | GQ246712.1 | 161 | 0 | Found in and frequently associated with dairy products | |
Proteobacteria | Gammaproteobacteria | Legionellales | De novo cluster 43 | 0 | 160 | Unknown Legionellales bacterium | ||||
Firmicutes | Bacilli | Lactobacillales | Streptococcaceae | Streptococcus | 1082539 | JF146348.1 | 0 | 155 | Uncultured bacterium found at human skin | |
Firmicutes | Bacilli | Bacillales | Bacillaceae | Bacillus | licheniformis | 574051 | FJ907196.1 | 0 | 147 | Found in melon juice, but usually associated with soil and ground-dwelling birds |
Proteobacteria | Betaproteobacteria | Burkholderiales | Alcaligenaceae | Achromobacter | 558264 | GQ417006.1 | 0 | 145 | Ubiquitous bacterium sampled on metal objects | |
Actinobacteria | Actinobacteria | Actinomycetales | Promicromonosporaceae | Cellulosimicrobium | 732609 | AB489904.1 | 0 | 142 | Luteimicrobium subarcticum, sampled in soil from the subarctic Rishiri Island (Japan) | |
Proteobacteria | Gammaproteobacteria | Xanthomonadales | Sinobacteraceae | Nevskia | ramosa | 104155 | JF006394.1 | 0 | 129 | Ubiquitous ammonia collecting freshwater bacterium |
Proteobacteria | Gammaproteobacteria | Xanthomonadales | Sinobacteraceae | 240468 | EU234312.1 | 0 | 124 | Uncultured bacterium found in penicillin-polluted wastewater | ||
Proteobacteria | Gammaproteobacteria | Xanthomonadales | Xanthomonadaceae | Stenotrophomonas | 1083508 | JF037881.1 | 0 | 112 | Bacterium from a diverse group of soil bacteria/pathogens | |
Proteobacteria | Alphaproteobacteria | Caulobacterales | Caulobacteraceae | 866365 | JF043115.1 | 111 | 0 | Unknown Caulobacteraceae | ||
Proteobacteria | Gammaproteobacteria | Aeromonadales | Aeromonadaceae | Aeromonas | 839235 | HM779182.1 | 106 | 0 | Dominant bacterium found in zebrafish gut |
