Table 2 Overview of the outlier scan.

From: Genetic hitchhiking and resistance evolution to transgenic Bt toxins: insights from the African stalk borer Busseola fusca (Noctuidae)

Area

A 1

A 2

Locus

F ST

log(PO)

f Bt

f nBt

P

f Bt

f nBt

P

73

0.10

>1000

—

—

—

—

—

—

81

0.14

>1000

0.91

0.66

0.254

0.72

0.75

0.974

110

0.20

>1000

0.56

0.29

0.597

0.11

0.18

0.147

184

0.08

1.6

—

—

—

—

—

—

187

0.07

1

0.98

0.87

0.231

—

—

—

192

0.12

>1000

0.71

0.99

0.005**

—

—

—

204

0.14

>1000

0.67

0.97

0.002**

—

—

—

208

0.07

1

—

—

—

—

—

—

231

0.08

1.3

—

—

—

—

—

—

299

0.08

1.3

0.66

0.93

0.004**

—

—

—

306

0.08

1.2

—

—

—

—

—

—

331

0.14

>1000

—

—

—

0.80

0.83

0.639

369

0.15

>1000

0.98

0.68

0.002**

0.81

0.82

0.677

390

0.10

2.5

—

—

—

0.63

0.69

0.602

392

0.08

1.4

—

—

—

—

—

—

492

0.13

>1000

0.01

0.02

0.675

0.09

0.19

0.057

572

0.10

>1000

—

—

—

—

—

—

596

0.12

>1000

—

—

—

0.96

0.92

0.110

615

0.15

>1000

—

—

—

0.78

0.80

0.844

617

0.16

>1000

0.75

0.48

0.319

—

—

—

631

0.08

1.6

—

—

—

—

—

—

738

0.16

>10

0.97

0.81

0.700

0.88

0.95

0.176

759

0.11

2.4

—

—

—

—

—

—

782

0.12

>1000

—

—

—

0.90

0.82

0.421

818

0.11

>1000

—

—

—

—

—

—

821

0.09

1.3

—

—

—

0.77

0.82

0.534

  1. The three first columns display outlier loci that were detected while performing an overall analysis. In each geographical region, A1 and A2, comparisons of marker frequency between Bt fields (fBt) and non-Bt fields (fnBt) were carried at various outlier loci. The P-values refers to a mixed generalised linear model (binomial family) with spatially correlated random effects. —, Locus detected as an outlier in the overall analysis but no longer significant when analysing A1 and A2 separately. Note that the absence of contrasts between Bt and non-Bt fields was verified at all outlier loci within each zone but are not displayed here for the sake of simplicity. Significance level: **P<0.01.
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