Table 1 Top 10 most upregulated genes in nickel-resistant white birch (Betula papyrifera) compared with susceptible genotypes

From: Evidence of prokaryote like protein associated with nickel resistance in higher plants: horizontal transfer of TonB-dependent receptor/protein in Betula genus or de novo mechanisms?

Transcript ID

FPKM

Log2FC

adj.P.Val

Description

 

Res 1

Res 2

Sus 1

Sus 2

   

TR99219|c0_g1

88.837

261.961

0

0.54

11.54

1.97E-07

TonB-dependent receptor

TR91600|c2_g5

209.847

415.208

0

0

10.50

1.92E-18

TonB family protein

TR55738|c2_g6

49.072

24.947

0

0.048

10.14

3.40E-09

F-box/LRR-repeat protein

TR117076|c0_g1

75.234

281.904

0

0

10.02

3.56E-16

Calnexin

TR96264|c0_g1

2.728

3.487

0

0

9.46

4.57E-14

4-Hydroxyphenylacetate 3-monooxygenase oxygenase component

TR78530|c1_g1

44.645

71.609

0.115

0.072

9.44

3.09E-05

PREDICTED: protein PHLOEM PROTEIN 2-LIKE A1-like

TR86018|c0_g2

42.155

64.06

0

0

9.34

1.53E-13

Proline-rich protein PRP1

TR67414|c0_g5

48.434

40.922

0

0

8.90

5.98E-12

Protein induced upon tuberization

TR109068|c1_g1

10.829

25.767

0

0

8.88

1.27E-11

Putative transmembrane protein

TR100502|c2_g1

5.78

18.454

0

0

8.83

2.34E-11

NA

  1. Abbreviations: adj.P.Val, adjusted P-values; FPKM, fragments per kilobase of transcript per million mapped reads; Log 2FC, fold change from log2.
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