Table 2 Top 10 most downregulated (fold change) genes in nickel-resistant white birch (Betula papyrifera) compared with susceptible genotypes

From: Evidence of prokaryote like protein associated with nickel resistance in higher plants: horizontal transfer of TonB-dependent receptor/protein in Betula genus or de novo mechanisms?

Transcript ID

FPKM

Log2FC

adj.P.Val

Description

 

Res 1

Res 2

Sus 1

Sus 2

   

TR16661|c0_g1

0

0

14.611

14.912

−11.94

2.78E-20

A protein

TR94889|c2_g1

0

0.028

232.706

100.675

−11.65

1.14E-14

mRNA cap guanine-N7 methyltransferase 2 isoform X2

TR53148|c0_g1

0

0

14.082

13.831

−10.85

3.07E-16

Replication-associated protein A

TR55969|c0_g1

0

0

26.541

55.026

−9.87

7.29E-13

Ankyrin repeat family protein

TR94980|c2_g4

0

0

65.692

57.535

−9.50

9.80E-12

Serine/threonine-protein kinase

TR61028|c0_g1

0

0

54.682

175.439

−9.19

1.07E-10

NA

TR56209|c7_g8

0

0

114.437

89.869

−9.14

1.56E-10

Putative disease resistance protein RGA3

TR35375|c2_g19

0

0

110.296

66.672

−8.93

6.51E-10

Chaperone protein dnaJ 8, chloroplastic isoform X2

TR79073|c0_g1

0

0

132.672

1.609

−8.90

8.14E-10

Putative ribonuclease H protein At1g65750-like

TR35437|c1_g1

0

0

44.098

88.2

−8.90

7.95E-10

NA

  1. Abbreviations: adj.P.Val, adjusted P-values; FPKM, Fragments Per Kilobase of transcript per Million mapped reads; Log 2FC, Fold change from log2.
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