Table 1 Breed groups, breed names, acronyms, number of samples genotyped per breed (N), country of origin, mean observed (Ho) and expected heterozygosities (He) and mean number of alleles per locus (MNA) estimated with 24 microsatellites in 45 pig breeds
Group | Breed | Acronym | N | Country | H e | H o | MNA |
---|---|---|---|---|---|---|---|
C1 | DUROC | DUR | 50 | UK | 0.56 | 0.55 | 4.0 |
C2 | PIETRAIN | PIE | 46 | UK | 0.60 | 0.60 | 5.2 |
C2 | LARGE WHITE | LWH | 29 | UK | 0.56 | 0.55 | 4.6 |
C2 | LANDRACE | LDR | 26 | UK | 0.60 | 0.57 | 4.4 |
C2 | LARGE WHITEXLANDRACE | LXW | 19 | UK | 0.61 | 0.67 | 4.5 |
CA | MULEFOOT | MFT | 36 | USA | 0.43 | 0.41 | 3.3 |
CA | CRIOLLO DE EL SALVADOR | SAL | 21 | El Salvador | 0.67 | 0.57 | 6.3 |
CA | CRIOLLO DEL PACIFICO | CCP | 42 | Colombia | 0.69 | 0.64 | 8.0 |
CA | CRIOLLO BOLIVIANO | BOL | 34 | Bolivia | 0.66 | 0.63 | 7.2 |
CA | PAMPA ROCHA | PRC | 32 | Uruguay | 0.58 | 0.57 | 5.1 |
CA | CARACOLERO DRY | NED | 50 | Argentina | 0.70 | 0.60 | 8.2 |
CA | CARACOLERO WET | NEW | 40 | Argentina | 0.63 | 0.55 | 6.8 |
CB | RED WATLE HOG | RWH | 35 | USA | 0.49 | 0.48 | 4.3 |
CB | NEW MEXICO | BCS | 20 | USA | 0.63 | 0.55 | 5.4 |
CB | PELON MEXICANO | MEX | 49 | Mexico | 0.63 | 0.45 | 6.5 |
CB | CRIOLLO CUBANO | CUB | 50 | Cuba | 0.65 | 0.65 | 7.6 |
CB | CRIOLLO VENEZOLANO | VEN | 30 | Venezuela | 0.64 | 0.59 | 6.3 |
CB | ZUNGO | ZUN | 33 | Colombia | 0.60 | 0.58 | 5.2 |
CB | CRIOLLO ECUATORIANO | ECU | 50 | Ecuador | 0.70 | 0.61 | 8.7 |
CC | GUINEA HOG | GHO | 34 | USA | 0.56 | 0.48 | 5.2 |
CC | CRIOLLO DE GUADALUPE | GUA | 35 | Guadeloupe | 0.69 | 0.64 | 7.1 |
CC | SANPEDREÑO | SPD | 14 | Colombia | 0.63 | 0.64 | 5.0 |
CT | CHATO MURCIANO | CHM | 50 | Spain | 0.46 | 0.39 | 4.5 |
CT | NEGRO CANARIO | NCA | 50 | Spain | 0.55 | 0.49 | 5.8 |
CT | CELTA | CEL | 27 | Spain | 0.60 | 0.50 | 4.5 |
CT | BISARO | BIS | 49 | Portugal | 0.63 | 0.55 | 5.6 |
CT | MALHADO DE ALCOBAÇA | MAL | 36 | Portugal | 0.52 | 0.51 | 3.7 |
CT | BERKSHIRE | BRK | 47 | UK | 0.44 | 0.45 | 3.2 |
CT | TAMWORTH | TWR | 41 | UK | 0.52 | 0.52 | 3.3 |
CT | LARGE BLACK | LBL | 47 | UK | 0.54 | 0.51 | 4.5 |
MD | RETINTO | RET | 50 | Spain | 0.55 | 0.52 | 5.5 |
MD | ENTREPELADO | ENT | 50 | Spain | 0.56 | 0.56 | 5.5 |
MD | TORBISCAL | TOR | 50 | Spain | 0.53 | 0.47 | 4.8 |
MD | NEGRO DE LOS PEDROCHES | NPE | 29 | Spain | 0.56 | 0.55 | 4.2 |
MD | LAMPIÑO | LAM | 50 | Spain | 0.57 | 0.53 | 5.8 |
MD | MANCHADO DE JABUGO | MJA | 41 | Spain | 0.39 | 0.40 | 3.4 |
MD | NEGRO DE FORMENTERA | NFO | 20 | Spain | 0.42 | 0.35 | 3.8 |
MD | NEGRO MALLORQUIN | NMA | 20 | Spain | 0.56 | 0.51 | 4.6 |
MD | EUSKAL TXERRIA | ETX | 50 | Spain | 0.39 | 0.39 | 3.8 |
MD | ALENTEJANO | ALE | 50 | Portugal | 0.59 | 0.52 | 6.5 |
MD | MANGALIÇA | MAN | 25 | Hungary | 0.42 | 0.35 | 3.2 |
WB | WILD-BOAR PORTUGAL | PWB | 39 | Portugal | 0.59 | 0.56 | 6.5 |
WB | WILD-BOAR SPAIN | SWB | 50 | Spain | 0.60 | 0.55 | 6.3 |
WB | WILD-BOAR POLAND | EWB | 12 | Poland | 0.58 | 0.58 | 4.5 |
WB | WILD-BOAR ITALY | IWB | 12 | Italy | 0.46 | 0.49 | 3.0 |
Total | 45 | 1670 | 18 | 0.57±0.04 | 0.53±0.02 | 5.23±2 |