Table 3 Contributions of pig breeds to overall genetic diversity according to: Weitzman method (PC_WE), proportional variation of expected heterozygosity (PC_He), aggregate diversity (PC_Fst), the Piyasatian and Kinghorn equation (PC_5:1), marker estimated kinships (MEKs), weighted log-linear model (WLM), weighted log-linear mixed model (WLMM) and average coancestries (fm)

From: Conservation priorities of Iberoamerican pig breeds and their ancestors based on microsatellite information

Group	Acronym	PC _WE	PC _He	PC _WE -P _He combined approaches		Core Set
				PC _Fst	PC _5:1	PC _MEK	PC _WLM	PC _WLMM	fm
C1	DUR	3.7	−0.03	0.74	3.11	0	0.00433	0.027	0.019
C2	LWH	4.5	0.09	1.00	3.77	0.105	0.08	0.035	0.158
C2	PIE	2.2	0.17	0.59	1.88	0	0.01	0.028	0
C2	LDR	2.5	0.28	0.73	2.11	0.055	0.06	0.028	0.093
C2	LXW	2.2	0.32	0.71	1.88	0.063	0	0.030	0.029
CA	MFT	4.8	−0.47	0.61	3.92	0	0	0.010	0
CA	PRC	2.1	0.13	0.53	1.74	0	0	0.016	0
CA	NED	0.8	0.22	0.34	0.72	0	0	0.021	0
CA	BOL	0.9	0.33	0.44	0.78	0	0.20	0.036	0.138
CA	SAL	0.3	0.43	0.40	0.32	0	0	0.023	0
CA	CCP	0.8	0.59	0.63	0.75	0.206	0.03	0.027	0.074
CA	NEW	0.4	0.60	0.55	0.41	0.056	0.01	0.027	0
CB	RWH	4.1	−0.23	0.65	3.34	0	0	0.014	0
CB	CUB	0.6	−0.10	0.03	0.45	0	0.32	0.036	0
CB	MEX	0.5	0.18	0.25	0.45	0	0	0.022	0
CB	ZUN	1.2	0.18	0.38	1.00	0	0	0.023	0
CB	BCS	0.9	0.22	0.37	0.82	0	0.01	0.027	0.086
CB	VEN	1.1	0.31	0.46	0.93	0	0.02	0.026	0
CB	ECU	0.3	0.56	0.51	0.34	0	0	0.026	0.029
CC	GHO	3.7	−0.02	0.75	3.08	0.102	0.04	0.026	0
CC	SPD	1.0	0.27	0.41	0.86	0	0	0.023	0
CC	GUA	0.9	0.52	0.59	0.80	0.383	0.10	0.028	0.727
CT	CHM	4.5	−0.49	0.53	3.64	0	0	0.011	0
CT	BRK	4.9	−0.41	0.69	4.05	0	0	0.014	0
CT	LBL	4.2	−0.12	0.76	3.46	0	0.23	0.031	0.01
CT	TWR	4.6	−0.06	0.89	3.81	0.070	0	0.024	0.084
CT	MAL	4.0	−0.04	0.79	3.31	0	0	0.016	0
CT	NCA	4.3	0.05	0.91	3.55	0.100	0.00047	0.025	0.100
CT	CEL	1.1	0.09	0.31	0.96	0	0	0.021	0
CT	BIS	1.0	0.26	0.41	0.86	0	0	0.023	0
MD	MJA	4.7	−0.81	0.32	3.77	0	0	0	0
MD	ETX	4.5	−0.75	0.32	3.59	0	0	0.021	0
MD	NFO	4.8	−0.64	0.47	3.86	0	0	0.011	0
MD	MAN	4.6	−0.61	0.45	3.71	0	0	0.018	0
MD	TOR	3.8	−0.21	0.62	3.16	0	0	0.017	0
MD	RET	0.4	−0.19	−0.06	0.32	0	0	0.015	0
MD	ENT	0.3	−0.15	−0.05	0.25	0	0	0.015	0
MD	LAM	1.0	−0.09	0.13	0.78	0	0	0.018	0
MD	ALE	0.8	−0.08	0.10	0.65	0	0	0.017	0
MD	NPE	1.6	−0.06	0.28	1.30	0	0	0.016	0
MD	NMA	2.4	0.04	0.52	2.00	0	0	0.016	0
WB	IWB	4.9	−0.40	0.69	4.01	0.205	0.03	0.027	0.096
WB	EWB	2.4	−0.01	0.48	1.98	0	0.02	0.029	0.007
WB	PWB	2.0	0.03	0.42	1.63	0	0.05	0.031	0
WB	SWB	1.1	0.10	0.31	0.95	0	0	0.023	0

Highly prioritized breeds are in bold and shaded dark.

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