Table 2 Genetic diversity of slinger Chrysoblephus puniceus and santer Cheimerius nufar estimated with microsatellites and mitochondrial DNA

From: Sex change and effective population size: implications for population genetic studies in marine fish

 

Microsatellites

Mitochondrial DNA

 

Location

N

NA

AR

He

Ho

FIS

Ne

Ne(HWE)LD

Ne(HWE)ABC

N

Nhap

Hd

π

C. puniceus (slinger)

PE

43

18.5

18

0.83

0.78

0.05

835 (287 to ∞)

707 (259 to ∞)

 

24

23

0.996

0.03

 

PR

41

18.7

18.2

0.83

0.81

0.02

128 (93 to 187)

535 (228 to ∞)

 

25

24

0.997

0.03

 

RB

38

18

18

0.83

0.79

0.04

166 (114 to 292)

462 (198 to ∞)

 

26

26

1

0.03

 

All

125

18.4

18.1

0.83

0.79

0.04

371 (289 to 511)

601 (404 to 1124)

560 000 (52 000 to 980 000)

75

65

0.996

0.03

C. nufar (santer)

PE

43

11.6

11.8

0.72

0.74

0.06

∞ (−261 to ∞)

∞ (327 to ∞)

 

25

22

0.99

0.04

 

PR

45

12.4

12.4

0.74

0.76

−0.04

∞ (−340 to ∞)

∞ (733 to ∞)

 

26

20

0.969

0.04

 

RB

42

12.1

12.1

0.72

0.70

0.02

∞ (405 to ∞)

∞ (353-∞)

 

26

24

0.994

0.04

 

All

131

12

12.1

0.73

0.73

0.01

2236 (654 to ∞)

3233 (743 to ∞)

370 000 (23 000 to 960 000)

77

55

0.984

0.04

  1. Abbreviations: AR, allelic richness; FIS, inbreeding coefficient; Hd, haplotype diversity; He, expected heterozygosity; Ho, observed heterozygosity; HWE, hardy-weinberg equilibrium; N, number of samples analysed; NA, number of alleles; Nhap, number of haplotypes; π, nucleotide diversity; PE, Port Edward; PR, Park Rynie; RB, Richards Bay.
  2. The three Ne estimates refer to, in order: (i) estimates based on LDNe using all loci; (ii) estimates based on LDNe excluding loci departing from HW equilibrium; (iii) estimates based on DIYABC.
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