Table 1 Hierarchy of coalescent models in decreasing order of generality

From: On the importance of skewed offspring distributions and background selection in virus population genetics

Coalescent model

Allows MMs?

Allows simultaneous MMs?

Distribution and parameters

References

Ξ-Coalescent

Yes

Yes

MMC events occur at rate λ, with a specific measure ξ on the infinite simplex and which allows an arbitrary number of simultaneous mergers.

Schweinsberg (2000); Möhle and Sagitov (2001)

Λ-Coalescent

Yes

No

MMC events occur at rate λ (but 1 event/time)

Donnelly and Kurtz (1999); Pitman (1999); Sagitov (1999)

Ψ-Coalescent

Yes

No

λ follows a distribution that depends on Ψ, that is,, the fraction of the population replaced by the offspring of a single individual

Eldon and Wakeley (2006); Eldon and Wakeley (2008); Eldon and Wakeley (2009); Eldon and Degnan (2012)

Beta-coalescent

Yes

No

λ follows β-distribution: β(α, 2-α) with 1α<2

Schweinsberg (2003); Berestycki et al. (2007); Berestycki et al. (2008); Birkner and Blath (2008); Birkner et al. (2013); Steinrücken et al. (2013)

Bolthausen–Sznitman

Yes

No

λ follows β-distribution with α=1: β(1,1)=uniform on [0,1]

Bolthausen and Snznitman (1998); Basdevant and Goldschmidt (2008); Neher and Hallatschek (2013)

Kingman coalescent

No

No

λ follows β-distribution with α=2; Λ has unit mass at 0 (Λ(dx)=δ0(x)dx)

Kingman (1982)

  1. Abbreviations: MM, multiple merger; MMC, multiple-merger coalescent.
  2. Coalescent models listed in decreasing order with respect to generality.