Table 4 Examples of DNA fingerprints based on the full array of 25 SNPs for longan tree genotype identification.

From: Developing single nucleotide polymorphism (SNP) markers from transcriptome sequences for identification of longan (Dimocarpus longan) germplasm

a. Examples of confirmed identical genotype for multiple trees in same cultivar

Cultivar

Tree code

475

477

479

480

483

486

488

489

494

496

499

503

504

505

507

508

509

511

515

517

518

520

544

554

556

Tiger Eye

F2-WB-T1

C G

T T

C C

C T

G G

G T

G T

C T

T T

G A

T T

A A

C T

C C

G G

C C

C C

G A

A A

C T

C C

C T

C T

A A

T T

Tiger Eye

F2-WB-T2

C G

T T

C C

C T

G G

G T

G T

C T

T T

G A

T T

A A

C T

C C

G G

C C

C C

G A

A A

C T

C C

C T

C T

A A

T T

Fuk Yan

FI-R10-T2

C G

T T

C C

C T

G T

T T

G G

C T

G T

G G

G T

A C

T T

G G

A G

C C

C T

A A

A T

C T

C G

C T

T T

A A

T T

Fuk Yan

FI-R10-T3

C G

T T

C C

C T

G T

T T

G G

C T

G T

G G

G T

A C

T T

G G

A G

C C

C T

A A

A T

C T

C G

C T

T T

A A

T T

Egami

FI-R8-T5

C G

C T

C C

C C

G T

T T

G T

C T

G T

G G

T T

A C

C C

C G

A G

C C

C T

A A

A T

C T

C C

C C

C C

A A

T T

Egami

FI-R14-T1

C G

C T

C C

C C

G T

T T

G T

C T

G T

G G

T T

A C

C C

C G

A G

C C

C T

A A

A T

C T

C C

C C

C C

A A

T T

Egami

FI-R14-T6

C G

C T

C C

C C

G T

T T

G T

C T

G T

G G

T T

A C

C C

C G

A G

C C

C T

A A

A T

C T

C C

C C

C C

A A

T T

Egami

FI-R15-T2

C G

C T

C C

C C

G T

T T

G T

C T

G T

G G

T T

A C

C C

C G

A G

C C

C T

A A

A T

C T

C C

C C

C C

A A

T T

Egami

FI-R15-T5

C G

C T

C C

C C

G T

T T

G T

C T

G T

0 0

T T

A C

C C

C G

A G

C C

C T

A A

A T

C T

C C

C C

C C

A A

T T

Egami

FI-R16-T3

C G

C T

C C

C C

G T

T T

0 0

C T

G T

G G

T T

A C

C C

C G

A G

C C

C T

A A

A T

C T

C C

C C

C C

A A

T T

Egami

FI-R16-T4

C G

C T

C C

C C

G T

T T

G T

C T

G T

G G

T T

A C

C C

C G

A G

C C

C T

A A

A T

C T

C C

C C

C C

A A

T T

b. Example of homonymous mislabeling (off-type—trees with same cultivar name but different SNP genotypes)

Cultivar

Tree code

475

477

479

480

483

486

488

489

494

496

499

503

504

505

507

508

509

511

515

517

518

520

544

554

556

E Wai

FI-R14-T3

C C

C T

C C

C C

G T

T T

0 0

C C

T T

A A

T T

A C

C T

C G

A G

C C

C C

A A

A T

T T

C C

C C

T T

A A

T T

E Wai

FI-R14-T4

C G

T T

C C

C C

G T

T T

G T

C C

G T

G G

T T

A C

C C

C G

A G

C C

C T

A A

A T

C T

C C

C C

C C

A A

T T