Table 3 mRNAs assigned to M. tundripaludum in the Knudsenheia metatranscriptome

From: Organic carbon transformations in high-Arctic peat soils: key functions and microorganisms

Annotation

AC

Function

No. of reads

pmoC

ZP_07656564.1

Methane oxidation

8

pmoA

ZP_07656563.1

Methane oxidation

7

pmoB

ZP_07656562.1

Methane oxidation

6

CsbD family protein

ZP_07656622.1

Stress response

2

MgtE intracellular region

ZP_07654467.1

Magnesium transport

2

Transport-associated protein

ZP_07656600.1

Transport

2

Methanol dehydrogenase

ZP_07652313.1

Methanol oxidation

1

6-Phospho 3-hex.

ZP_07653633.1

RuMP pathway step 2

1

Succinate dehydrogenase

ZP_07652392.1

Electron transport Complex II

1

NADH dehydrogenase

ZP_07653777.1

Electron transport Complex I

1

NADH:ubiquinone oxidoreductase

ZP_07655325.1

Electron transport Complex I

1

Elec. trans. prot. SenC

ZP_07652162.1

Biogenesis of respiratory systems

1

Nitrogenase iron protein

ZP_07654124.1

Nitrogen fixation

1

  1. Abbreviations: elec. trans. prot. SenC, electron transport protein SenC; mRNA, messenger RNA; RuMP, ribulose monophosphate.
  2. Functionally annotated transcripts related to energy, carbon and nitrogen metabolism are shown. mRNA sequences were taxonomically assigned to M. tundripaludum by MEGAN (see Materials and methods for details).