Table 2 Quality-controlled Tara Oceans pyrosequence data
From: Exploring nucleo-cytoplasmic large DNA viruses in Tara Oceans microbial metagenomes
Sample name | Total size (bp) | Number of reads | G+C (%) | Average size (bp) | Number of predicted ORFs | Average ORF size (aa) |
|---|---|---|---|---|---|---|
3_S | 21 533 646 | 63 994 | 37 | 336 | 65 656 | 99 |
4_S | 52 953 075 | 140 754 | 38 | 376 | 149 018 | 108 |
6_S | 36 129 806 | 95 255 | 48 | 379 | 98 996 | 111 |
7_S | 98 750 180 | 332 049 | 38 | 297 | 335 408 | 90 |
7_D | 279 389 388 | 1 117 888 | 37 | 250 | 1 013 853 | 81 |
23_S | 67 695 268 | 196 190 | 39 | 345 | 201 447 | 101 |
23_D | 83 539 478 | 239 447 | 38 | 349 | 246 948 | 102 |
30_S | 89 180 466 | 256 028 | 37 | 348 | 268 616 | 101 |
31_S | 245 463 121 | 614 743 | 39 | 399 | 660 949 | 114 |
36_S | 245 945 064 | 737 506 | 39 | 333 | 757 448 | 100 |
38_S | 214 253 370 | 601 110 | 39 | 356 | 631 351 | 103 |
38_Z | 223 188 575 | 638 843 | 45 | 349 | 659 041 | 104 |
39_S | 233 273 851 | 590 664 | 43 | 395 | 629 501 | 114 |
39_Z | 249 558 778 | 679 589 | 46 | 367 | 708 056 | 108 |
43_S | 167 515 516 | 529 506 | 37 | 316 | 545 641 | 93 |
46_S | 251 310 870 | 648 425 | 41 | 388 | 689 641 | 112 |
49_S | 222 417 021 | 680 573 | 43 | 327 | 696 974 | 98 |