Figure 3
Pseudogene pairs homologous to OA-DHCβ and IA-DHC1β in E. huxleyi CCMP1516. (a, top) Domains of the OA-DHCβ from C. reinhardtii (DYHB_CHLRE). (a, middle) Complete homology to DYHB_CHLRE is encoded on a long paired-end Illumina contig from 92A. (a, bottom) Scaffolds 48 and 399 in the CCMP1516 genome assembly share high synteny and homology between each other and the 92A contig but exhibit distinct loss-of-function deletions in the DYHB_CHLRE-homolog. Internal PCRs, 1516 Illumina read contigs uniquely supporting JGI assembly at scaffolds 48 and 399, and coloring of homology among scaffolds and the 92A contig as in Figure 2. (b) As in Figure 2a and (a), but for the IA-DHC1β/DYH7_RAT homologs on a long 92A Illumina paired-end read contig and scaffolds 21 and 722.
